Smart Folders not displaying emails

I have a few smart folders set up that I use on a daily basis in Mail. One displays all the mail that came in Today, one for Yesterday etc.
After upgrading to Yosemite, the folders are no longer displaying the messages (in the Unread folder it says 3 but in the Inbox there are 72 unread). Even the badge on the Mail icon says I have 3 messages which is false.
I use iCloud and 2 Gmail accounts

Never mind. Looks like it just needed time to sort itself out - seems to be correctly reading all the mail again.

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