Stalling screen, silent harddrive? 10.8.4

I recently had a corrupted volume directory on my boot hd.  I installed a larger 3T drive and used Techtool Pro to export, clean the directory, and optimize. I ported the fixed clone to the 3T and made it the boot drive. The old boot still says it is corrupt.
HOWEVER, I am noticing a problem that may be related to a hardware issue and I don't know how to tell for sure.  
The symptoms are:  after a time of inactivity, I come to find the screen unresponsive. The mouse still moves but browsers will not load pages, Mail and other programs become completely unresponsive, and the spinning beachball of death happens when you hover over finder areas.  Quitting programs will not quit, nor will force quit work. 
The harddrives are silent and hitting keys does not "wake up" the system.  It seems like there may be a communication problem with the logic board and the harddrives? 
Also, upon restart,  it is taking FOREVER to boot.  I see the grey screen with the Apple and it is grindingly slow.  The harddrives will cylcle up but it seems like it is just taking way too long. This is before you get to the login screen names.  
Also, I installed 10.8.4 yesterday, but did a safeboot, fsck, permissions repair, etc.  And today I redid fsck and it found 45 orphaned files.  That seems like a stall sympton that isn't writing properly to the directory, which often happens when things stall out.
SMART tests pass for all drives which have it.  I'm wondering though one drive could be starting to fail and cause a problem.

I am experiencing the same phenomena as barnhouse21 except that I am using an older MacBook running 10.6.8.  My MacBook is a an Intel Core 2 Duo 667MHz with 2GB DDR2 SDRAM.
There is no pattern with respect to when the screen black out occurs - it is most frequent within the first 5 to 10 minutes of use after boot up but it has occurred much later.   I have not noted any particular combination of applications running when this occurs (but I always have a browser going...)
The black out period lasts only a few seconds (about 3 - 5). 
I get the fact this is a (more than) six year old unit but this problem started very recently - within the last 4 - 6 weeks.  Everything else on this unit works fine.  
I respectfully disagree with Carolyn's POV on the expectation of a power issue or logic board issue.  It seems a good number of people are posting about this problem with MacBooks of widely different vintages - wouldn't that suggest some other source? 

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    zlib_deflate 20302 1 ppp_deflate
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    ppp_async 7162 1
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    slhc 5233 1 ppp_generic
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    rndis_host 5811 1 rndis_wlan
    cdc_ether 4246 1 rndis_host
    usbnet 15370 3 rndis_wlan,rndis_host,cdc_ether
    cdc_phonet 5234 0
    cdc_acm 16401 3
    phonet 25886 1 cdc_phonet
    mii 4003 1 usbnet
    rfcomm 34757 8
    bnep 9253 2
    joydev 9959 0
    snd_hda_codec_realtek 297871 1
    snd_hda_codec_hdmi 22784 1
    arc4 1450 2
    uvcvideo 62143 0
    ecb 2113 2
    videodev 78070 1 uvcvideo
    snd_hda_intel 22186 2
    radeon 989827 3
    snd_hda_codec 77543 3 snd_hda_codec_realtek,snd_hda_codec_hdmi,snd_hda_intel
    media 10437 1 videodev
    v4l2_compat_ioctl32 8364 1 videodev
    brcmsmac 599290 0
    eeepc_wmi 2287 0
    asus_wmi 13524 1 eeepc_wmi
    sparse_keymap 3128 1 asus_wmi
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    snd_hwdep 6342 1 snd_hda_codec
    drm_kms_helper 27529 1 radeon
    mac80211 211662 1 brcmsmac
    pci_hotplug 25648 1 asus_wmi
    snd_pcm 73736 3 snd_hda_codec_hdmi,snd_hda_intel,snd_hda_codec
    evdev 9530 9
    btusb 11585 1
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    pcspkr 1891 0
    bluetooth 128303 23 rfcomm,bnep,btusb
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    i2c_piix4 8296 0
    sg 25621 0
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    k10temp 2923 0
    sp5100_tco 4608 0
    cfg80211 146369 3 rndis_wlan,brcmsmac,mac80211
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    i2c_algo_bit 5239 1 radeon
    soundcore 6178 1 snd
    battery 10945 0
    processor 24328 2
    atl1c 32631 0
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    button 4510 0
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    i2c_core 20165 6 videodev,radeon,drm_kms_helper,drm,i2c_piix4,i2c_algo_bit
    ext4 368162 3
    mbcache 5793 1 ext4
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    sd_mod 27379 5
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    ahci 20905 4
    libahci 18925 1 ahci
    ehci_hcd 39359 0
    libata 173061 2 ahci,libahci
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    Last edited by ChALkeR (2011-07-25 17:22:51)

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    Last edited by ChALkeR (2011-07-25 17:22:30)

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    Hi Ben W. I don't have a good answer for you, but based on your information and what you've done, I think I would try starting the machine after disconnecting the harddrive. That requires taking the top off first, for which instructions are on ifixit.com.
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