Synced iPhone and most apps vanished

I synced my iPhone today like normal. (Original iPhone running 3.1.2) After the sync was finished, to my surprise and horror, almost all of my apps were gone. When I go into "Applications" in iTunes, I have 80 applications listed, but the vast majority of them have exclamation points next to their names, and when I double-click on one, I get this message: "The application "xxxxx" could not be used because the original file could not be found. Would you like to locate it?"
I did not sync the iPhone with any other computers or accounts between the time I used it today and the time I synced it like normal.
Any ideas how I can get my apps all back to normal?

Have you touched anything inside your iTunes folder where your iTunes library including 3rd party applications are stored?
To locate the an application, applications are stored in a Mobile Applications named folder in your iTunes folder. The default location for the iTunes folder is in your Music folder. Navigate to the Mobile Applications named folder within your iTunes folder to locate the app.

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