Synch app iPhone iTunes

I just got a new mac and when trying to synchronise my iPhone, I cannot synch my applications, the format is different on the iTunes (I have four fixed app on the bottom, and iTunes on the new computer has only 3). I wouldn´t like to get rid of the four app, but I would like to synch the app in the future and not to have to get back to my old computer
Note on the old computer I had 10.2.2 (14) and on the new one 10.2.2. (12) but it doesn´t find any updates.

In regards to iTunes content, an iPhone can be synced or manually managed with an iTunes library on a single computer only, and photos can be transferred from a single computer only. When syncing an iPhone with an iTunes library on a new or a different computer and the same for transferring photos, all iTunes content and photos transferred from another computer will be erased from the iPhone first.
After installing a new hard drive, your MB is detected as a new or different computer.
If the Genius Bar was able to recover your entire iTunes named folder from the failed hard drive, which stores your entire iTunes library including 3rd party apps, and placed the iTunes named folder in the same location on your new hard drive, this wouldn't be a problem.
Since all 3rd party apps were obviously not recovered from your failed drive, you have a couple of options. Assuming you have re-authorized your MB with your iTunes account with iTunes, with your iPhone connected and without syncing, at the iTunes menu bar go to File and select Transfer Purchases From - the name of your iPhone.
If all 3rd party apps on your iPhone do not transfer to your new iTunes library on your MB, you can re-download the apps with iTunes on your MB and you won't be charged again for a purchased app as long as you use the same iTunes account to re-download the app that was used to purchase the app originally.

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