Syncing and Apps....

If i buy a app through the phone, everything works fine with the phone and the app.......the problem i am having is.......once i sync, iTunes ask me if i want to transfer the apps, i select transfer now...... then you sync begins, but here is where the strange part is.......iTunes reinstalls all the apps i have......(as you can guess this makes my sync times very long as i have bout 20 apps...)......at the end of the sync i get an error message saying that there was a problem installing my app.......but when i disconnect my phone, all the apps are there and working.......
Is anyone else having these problems?????

I have and its annoying it also does a system back up on me every time and you want to talk about a long time of syncing maybe about 30mins or so
To be fair I have to say that it started happening to me once I had to reinstall I-Tunes because I got a virus from MultiMedia/games app .I was wondering if this virus came from one of the Apple Apps and is Apple inspecting there apps well enough to see if programmers aren't slipping in viruses through the Free Apps

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