System wide lag

Hello guys, new member here.
I'd like you guys to help me out with something here.
I have a 13 inch, mid 2013 macbook pro with a 2.9 ghz i7, 8 gb RAM and a 750 gig HDD.
My problem is every now and then there is a system wide lag which freezes pretty much everything and audio playing from itunes also pauses during that time, it's quite frustrating as i've been searching for a fix since yesterday but havent found anything that can completely fix it. Usually there is only itunes, safari, mail and maybe one or two more things open at a time. I have checked my HDD for issues but there seem to be none. I suspect that this is related to the CPU since while I was using safari, a process called WindowServer would start using around 35% CPU, with nothing that intensive open on the browser
Note: This was ocurring much more frequently this morning but it has gotten a bit better now after I downloaded chrome and started using it instead of safari, I would, however, like to use safari instead.
Thanks in advance, I would be very thankful if someone could help me out with this, I have my exams coming up and I rely on my laptop for a lot of stuff.

I've got this problem on Macbook pro (mid 2010, 2,4ghz i5, 8gb ram, nvidia gt330m)
I don't think it ever happened before upgrading to mavericks. But now it's horrible!
It seems to only happen to me when I'm running unity3D, but does happen every minute or even more often. And the system freezes for anywhere between a second and 15 seconds...

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