Taskbar icon disappears when right clicking

Hi,
at the moment I am struggling with deploying sequenced applications on Windows 2008R2 XenApp 6.5 Terminalservers. We are using App-V Sequencer/ Client App-V 5.0 SP2 HF4 with the App-V management server.
We have sequenced around about 10 app-v applications. The applications are working fine except one specific problem:
If anyone is right clicking the opened application on the Windows taskbar, the icon of the application is disappearing and turns into a completely white icon. This problem occurs, if we start directly the executable from the Windows Explorer or creating an
manual shortcut. The problem occurs with all 10 deployed applications.
If I enable shortcuts on the App-V servers, the problem is solved for the most applications. So if I start the application by clicking on the published icon in the start menu, the icon stays with an right click.
If I have enabled the shortcuts on the App-V server, I can also open the exe-file in the Windows Explorer and it works all fine.
Additional I have several applications, where the problem occurs, even if I have enabled the shortcuts.
I sequenced the applications several times (also with no exculsions or deleting anything in the package), I think its an general, not an sequencing, problem.
Does anyone has an idea about this strange behaviour?
Thanks for your help.
Tobias

I'm on a machine right now with a Sequenced Skype and Sequenced Office. An Outlook icon is in the taskbar, ditto Skype. I can right click without issue. Are you using the default configuration when publishing the applications or a custom?
Did you remove or exclude certain directories from the package e.g. Windows\Installer?
I honestly can't give you an answer as I haven't seen this behavior myself. Are you using anything like RES WorkSpace Manager or AppSense?...sometimes those can interfere with shortcuts
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