Thinkpad S1: Can't left-click some web elements with trackpad/mouse but can click with touchscreen?

Hey so this is a strangely specific problem.
For some websites I cannot click some drop-down menus with my cordless mouse, the trackpad, or trackpoint buttons, but am able to when I press on the touchscreen. Same with some online games I used to play like: http://shape.method.ac/
In the website above, I can't click and drag where it says to "Drag to get started' (For anyone else maybe experiencing the same problem) with my mouse, but pressing and dragging on the touchscreen works just fine.
Stylus doesn't work either.
Other items are still clickable.
I can open and close windows just fine, most links work, but it's these graphic elements that I can't interface with. I can't tell if this is an OS problem, browser, or something like HTML5 causing it.
It happens consistently though. Any help would be most appreciated.

I'm having this exact same problem but it doesn't seem related to sleeping. It just happened randomly, and restarting hasn't helped.

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