Time machine restore incomplete on new hard drive?

My seagate hard drive started to fail on my 2010 27" iMac (S.M.A.R.T fault, unfortunately not covered by the recall) and I have Best Buy geek squad warranty. I also have a 2T Time Capsule with backups, so I wasnt worried about losing any data (lots of pictures and tons of movies loaded into itunes). After waiting for the local best buy to send my machine off to get the HD replaced, getting it back and re-downloading the latest OSX, I restored it from my TC. The restore took about 30 hours (~450 Gb via wifi). Once it was complete I looked at a few things and was satisfied it restored my iMac back to the way it was just before I sent it off. After closer inspection, I noticed that about 1/3 of my movies were missing from iTunes. I thought, no problem, ill just go back 1 day in the time machine and get them. I guess since my hard drive is new, it didn't treat my iMac like it is the same computer. I can't scroll back in time on the time machine, or find a way to get my missing data back. Any help would be appreciated.

Drat. 
Try the things in #E4 of Time Machine - Troubleshooting.

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