Time Machine stopped updating files in subfolders on my external drive

I've been using Time Machine for about a year. I have two external drives connected. One is 2TB and is the "BACKUP" drive used for TM backups. The other, "VOLUME ONE" is 1TB and is used for client and media files. I went to look for a file in TM backups that had been on Volume One and it's not there. I then noticed that TM while had been performing backups, nothing was actually updating since August 3 (I'm not sure if that's the actually date but it was the most recent date on a quick check).
I then repaired permissions on the iMac Hard drive, repaired both external disks, trashed TM preferences, and shut down and then restarted. Seems everything is now backing up correctly except if you go into the subfolders on Volume One. For instance, "TestFile" is updated when it's VOLUME ONE/Folder1/Folder2/TestFile, but not if it gets placed one position down, VOLUME ONE/Folder1/Folder2/Folder3/TestFile. The only items I have excluded from backups are the BACKUP drive, /Applications and System Files and Applications. The files not being updated are not applications or preferences. Also, my BACKUP drive says it has 1.2 TB available.

My understanding of how this works is that hourly & daily backups "expire" & are automatically removed after 24 hours & one month respectively, but weekly backups never expire -- they are kept, as the preference panel says, until your backup disk is full.
Thus, if your backup drive fills up, TM will try to create space by removing older, unexpired hourly or daily backups (& optionally warn you about this) to make room for new ones, but it will not remove older weekly backups to make room for new hourly or daily ones.
If you think about it, this makes sense: a weekly backup is most likely much larger (in terms of actual file space) & contains many more files than a daily or hourly one, so it would be undesirable to delete a lot of files to make room for relatively few others.
IOW, the drive will eventually fill up with weekly backups & at that point, it is full, period.
Related comments:
I believe there is no danger in using the Leopard Finder to 'delete a file' in the time-stamped folders it exposes. Because of the changes made in the file system to support TM, what happens is only the link in that folder is deleted. Links in any other folders remain unaffected. Only when you remove the last link to the actual file does the file system mark its space unused in the directory, effectively the same as a normal file delete.
This is why just deleting an instance of a TM backed up file won't gain you more than a few bytes of drive space -- only by deleting all instances is the file space of the actual file freed up.
For similar reasons, Disk Utility's 'erase free space' function should be safe to use on a Time Machine volume for security reasons. Just don't use any disk utilities on this or any other Leopard-formatted drive that aren't rated for use with Leopard -- they don't know about the changes in the file system & could really mess things up if (for instance) they try to rebuild the directory structure from scratch.

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    Bill Dennen wrote:
    Waiting for index to be ready (-911 < 0)
    Bulk setting Spotlight attributes failed.</div>
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