Time Machine vs. Creating clone

Hi.
I used Time Machine to back-up my MacBook Pro after having to once again restore my iTunes to a previous version.  I missed a check box when I did my last updates.
At any rate, I mistaken thought that doing that would back-up everything and allow me to go back in time to a previous version of applications as well as files.  I learned this morning that is not the case.
I upgraded Safari, forgetting that the newest version has the search box combined with the address box, which I don't like.  I thought I could use Time Machine and restore my computer to what it was before this latest upgrade, but it says I don't have a back-up of my system.
So, two questions:
1.  How do I create a back-up of the entire system?
2.  I don't remember how I fixed Safari the last time, so any suggestions on how I can get it back to a version that has the search box off to the right?
Thanks for any advice you can provide.
J

See Pondini's TM FAQs, for starters. As for the Safari thing, reinstalling the OS should revert Safari to the 5.1.x version. If so, don't install the 6.x version, which IMO is crapola.

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    I just wanted to collect all my messages since oct 16th. under one roof. I have spent too much time with this problem already, will NOT edit this the way I should. It REALLY bugs me that Apple doesn't acknowlege it - would make life easier knowing that they are working on it.
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    Here we are solving this mess as well. My 1st gen TimeCapsule began to work odd two months ago, needed to do fresh backups every week or two. Finally got a new one this week. Seemed to work fine first, but today a complete stop with my network. Problems occured not immediately after the firmware 7.6 update though. Seems that my iWork backups are a bit of a mess too since Pages keeps showing an unwanted photo in a written article after deleteting it from there...
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    Unfortunately, the message pretty much says it all.
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    I'm afraid that AppleCare will tell you the same thing, but it's worth checking with them to see if there are any new developments in this regard for this puzzling issue which affects a small percentage of users.
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