Timelines have added "black" for no reason...

Hi there,
I'm seriously struggling to understand as to why I'm suffering this problem.
The deal is I've a fairly large DVD9 project in production and out of the 35 timelines 3 of them have mysteriously added around 30-40 seconds of black to themselves.
The three timelines in question are made-up of a single PSD and an AIFF file - each of the AIFF files runs for approximately 60 seconds with the PSD running to the same length.
When previewed in Encore 2 all is well - but when written out the mysterious black appears. My regime of checking involves writing the project out to a folder and then using a software DVD player to check. In this instance I've tried both Nero ShowTime and connected the drive to my Mac and consequently also tried Apple's DVD Player and in both cases the black appears across all three timelines under both players.
As a trial and error exercise I also constructed the three AVI's in place of the PSD and AIFF combination but to no avail!
Does anybody have any clues as to what is going on and possibly how I may be able to cure it?
Many thanks in advance.

For the record I've identified a fourth timeline in the project that also suffers the problem.
I've fortunately been able to rectify three out of the four by producing new timelines and dropping the same PDF & AIFF assets onto the new timelines and all is well.
The latest addition to this 'error', ie. timeline #4, runs for approx. 50 seconds and hangs around until around the 60 second marker before returning to its calling menu [ie., it plays around 10 seconds of black for no apprent reason].
Still none the wiser as to why this is the case... So, if anyone has any clues then please let me know!
Many thanks in advance once again.

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