Tool generated files missing after upgrade to Oracle Workshop for Weblogic

Hi,
I'm trying to migrate a beehive/netui web-application from Bea Workspace Studio 1.1 to Oracle Workshop for WebLogic 10R3. The application builds successfully, but when I access the application, I get a "Missing Struts Module Configuration" error.
I checked the build folder, and discovered that several tool-generated files where missing. Entire _pageflow folder is missing and all of the controls related files are missing.
Anyone have an idea of what is going on here?
Rune

Rune,
Could you provide details on the migration process you followed ?
Also are you trying to develop and deploy against WLS 10.3 ?
-Raj

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