Transparency issue bolding text

I've had this issue and I thought it was resolved...
On my pages, any text that has any transparent layer over or under it gets auto bolded. This is causing test to look ugly on some parts. I was told to place the text as top layer, but this is not fixing the issue and the text still has bad bolding where it as much as touches a transparent layer. Multiply transparency option is not helping. I have a catalog that needs to go out this week. Help pls...
PS: only affects when printing from a pdf file source. It is not visible until it is printed from the pds. Printing from indesign does not seem to have issues, but my printer uses pdf, and I can't send them my 20gig indesign folder.
Any suggestions?

In Acrobat Tools>Print Production>Output Preview>Preview Separations you can sample the output CMYK:

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