.Trashes on a flash drive

Hi,
I have a little Cruzer Mini 512 MB flash drive that I use with my mac and Windows machines at work. It came formatted in FAT16 and it never occurred to me to change that.
Of course, when I plug it into a Windows machine, all the hidden files and folders that my Mac copies over (such as ._filename, .DS_Store, etc) show up in Windows Explorer. Usually that doesn't bother me, as they are only about 1KB each.
I've done a bit of research online and I understand what these files are and what they do. That's not my question. My question is about the .Trashes folder--whenever I delete files from my flash drive in the Finder, instead of truly deleting them, it stuffs them in this .Trashes folder. I wouldn't mind that so much if the drive in question were an 80GB FireWire drive, but alas, it is not. My 512MB are precious.
Right now I need to transfer a 350MB file from one machine to another. I deleted everything from the flash drive, but it didn't actually delete, so now I have ~200MB of junk that won't even show up in Finder.
I tried using a utility called WhatSize, which sizes out even hidden directories and lets you delete them. Every time I delete a subfolder in .Trashes, unsurprisingly, it doesn't really delete and just creates another subfolder. When I tried to delete the entire .Trashes folder, it told me that was a no-no.
Obviously this entire problem would be solved if the drive were formatted HFS+. Even if that's possible, I don't want to do that because I'm moving this drive across operating systems.
Is there another solution? I want these files really gone so I can fit this 350MB file on here.
1.33 GHz Mac Mini Mac OS X (10.4.4)

The invisible .Trashes folder stores files and folders which you've placed in the Trash but haven't yet deleted; items you've moved to the Trash from the disk which contains your home folder are kept in the .Trash folder of your home folder. To delete the items from both folders, control-click the Trash icon in the Dock and choose Empty Trash; you can also empty the trash from the Finder's Finder menu, and an option to securely empty it is available on 10.3 and newer, which overwrites the data as well as deleting the files.
(10515)

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    ==========================================
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    =========================================
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