Triggering workflow with system generated files

I'm creating a workflow that is triggered when it encounters a content ID of D . It works perfect when I check-in a new content item ending in D, but when the system generates the discussion file ending in _D it doesn't trigger the workflow.
Do you know how I can trigger the workflow for system generated files? Thanks!

Umm, to be honest, I am lost even more. You mentioned several keywords and I can't figure out how to mix them together to make something reasonable:
- discussions
- a special folder for discussion files - does this mean that whole problem is that discussion files end up in the same folder as regular files and users don't like it?
I have just verified that if you create a discussion via WebDav for an item in a folder, the discussion file inherits the folder id of the item. However, if you modify it (I used UPDATE and just cleared it), the discussion is still available at the item's detail, but it is not visible in the folder - why would you set a folder for discussions at all, then?
- workflow - did you intend to use workflow mechanism to (auto)modify the folder of discussions?
If that's so, I think workflows is not good mechanism to do that - I'd expect in workflows to have some interaction with users (like approvals/rejects, which makes no sense to me for discussion entries)
I'm not sure if you can modify such a behavior on either Folders component, or ThreadedDiscussion components, but even if not, you should be able to do it via relatively easy custom component.

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