Trouble shooting File to Idoc scenario: wrong Idoc structure in target

Hi All,
             I am working in an file to idoc scenario. Now the scenario is running but the idoc I am sending from SAP XI is not matching with one received in SAP R/3 system. This is not a new scenario. The  scenario was already existing. I have done structural changes in Idoc structure and re-imported it in SAP XI. When the iodoc reaches SAP R/3 system I check its structure and data content. 4 of its fields are missing all 4 were newly added fields. Data from some fields are getting merged into one field within Idoc. data from one field is moving onto other fields in target. I have refreshed the metadata using IDX2 transcation within SAP XI but still getting same result.

Hi All,
I am able to see the changed idoc structure in IR. I have also tried cache refresh. I am trying to explain my problem once again with example.
Source Idoc in XI
      fieldname                            data
       f1                                       d1
       f2                                       d2
       f3                                       d33
       f4                                       d4
       f5                                       d5
Idoc structure received in SAP R/3 system. I am seeing through we02 transcation, inbound idoc
      fieldname                            data
       f1                                       d1
       f2                                       d2
       f4                                       d33d4
I have tried cache refresh, IDx2 metadata refresh, but no improvement of the situation.

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