Trouble with Clipping Masks

Hello!
I created a pattern in illustrator, and then I created an object, and I wanted to fill half of the object with the pattern, so I used a clipping mask to do this.. however, now when i try to group everything together, the clipping mask in released and the pattern spills all over the artbaord... when i try to copy and paste into a new document, everything is pasted as white instead. When i try to merge the layers, the clipping mask is released...
I'm not sure how to fix this and have been searching for a solution for it. I hope you can help me figure out how to keep the clipping mask from releasing..
Also, I tried rasterizing but that doesnt work either and it makes my shapes all rough and choppy!
Thank you

Thanks for replying but unfortunately that did not help!
I always select with the solid selection tool ^^ infact when i want to select everything i just use command+a.
Anyway, I'm still unable to group or copy the entire picture without the clipping mask releasing..

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