Trouble with Videora Converter

I tried using the videora iPod Converter and it got stuck on the Transcoding step. It says it is 100% done but it keeps going, and adding frames. Any idea how long this takes, or if i should just start over?

Check out this link http://www.pspvideo9.com/forums/viewtopic.php?t=2705
The relevant section states:
Progress meter incorrect
Problem - During transcodes, the progress meter can be incorrect; thus, transcoding continues after the meter hits 100% and time remaining is zero. People have been seeing this more often with VOB files and/or the H.264 codec.
Workaround - Figure out the length of your movie in seconds and compare that to the 'Processed' field. A 2-hour movie will not finish until Processed hits 7200 seconds.

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