TS1409 How do I mass convert all my videos in iTunes From FLV to MP4?!!

My problem is a simple one that YOU will, sooner or later, face---else you already faced it.  It is the DREADED mixed media from You Tube.       HOW DO I MASS CONVERT MY ITUNES FLV VIDEOS TO MP4 VIDEOS.  If MP4 will play Video & Audio---why do I need FLV files?
1.  I have an old APLINE IDA-X001 Digital Automobile Receiver that I have ported my iPOD Classic to via their Alpine Proprietary High Speed USB2 Cable.
2.  I have 800+ You Tube music videos from the 80s (what can I say, WE ARE ALL ENTOMBED IN THE MUSIC OF OUR YOUTH and I am a couple of months older than Steve Jobs---Double Nickel or should I say YEAR ZERO of our lord Rock & Roll!!!).  When driving, I just want to hear the Audio Files from my iPOD.
3. 90% of said You Tube videos are in Flash Video (FLV), 10% are MP4.
4. You can only play FLV on outputs that have videos, MP4 videos can play in video mode else audio only mode---THEREFORE I NEED TO CONVERT all my FLVs to MP4s on my iPOD Classic (160GB).
5. Yes, there are a handful of FREE Video Converter programs out there and the one I have AV8 will convert FLV to MP4 one file at a time...drip,drip,drip!!!
6. I have 800+ Music Videos---I will have died from old age before my iPod is filled.
7. My DESIRED END STATE is to flip a software switch and have all my iPOD FLV videos magically convert to MP4
8. You Tube Download Modality:  I find a song I like and Download it to RealPlayer.  Once downloaded, I PAINFULLY convert it to Ipod (can't do more than 9 songs at a time). Once in iTunes, I sync it to my iPOD classic and bam---my videos are in my my iPOD.
9.  Currently, the only songs that play on my iPOD are those I've purchased from iTunes.
10. Whudda I Do?  The Apple Tech guys haven't a clue. Also. If I can only do it manually (I've got movies mixed in as well), how do I set up an MP4 folder and then only transfer that folder on to my iPOD?!!!

The sync process for contact information, calendar events and bookmarks is bidirectional.
http://docs.info.apple.com/article.html?artnum=306071
The sync process for iTunes content and photos transferred from your computer to the iPhone is in one direction only and can be synced with iTunes on one computer only.
iTunes includes an option to transfer content purchased from the iTunes Store only from an iPod or iPhone - not for content acquired elsewhere that was transferred from iTunes to your iPhone.
You need to transfer your iTunes library from your Windows PC to your Mac.
http://docs.info.apple.com/article.html?artnum=304721
http://www.apple.com/support/switch101/

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