Unable to drag window around

Something very strange happens to me today and I can not figure out how to fix this, so I am hoping someone would shed some light here as it's driving me crazy.
I was working on my MBP today until somehow it got totally frozen and it did not respond to anything I do including attempt to shut down the machine. As a last resort, I had to press and hold the power button for 2-3 seconds to shut down the machine.
Upon re-booting my machine, now I notice I am UNABLE to drag the window around (like mail, ical, safari..etc). I can always drag (or move if you will ) the window around by press and hold down my thumb and with another finger. Now all of a sudden, that does not work for me anymore, and the only way to drag the window is to move the cursor to top of the window, tap twice with one finger, then drag.
I know this sound very bizarre and i am totally baffled by this. I was thinking perhaps when I shut it down using the power button, somehow something was not closed properly and it left something in a limbo state.
Would someone please tell me how to fix this? like remove some systems file or plist or whatever... please help as this is most annoying not able to drag the window around.

@macjack
I removed those two plists you suggested, restarted, it did not help
@andyball
Sorry for the confusion, I have always been able to place the cursor on the title bar of a window, hold down with my thumb and move with a second finger. Of course, now that does not work. Tapping twice when the cursor on the title bar is the only way I can move the window.
Additional info here, when I plug in a mouse, I can move while holding down the button.
I wonder if my trackpad is messed up.

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