Uneven color between background text frame and underlying frame fill

Hi. I'm using InDesign CS3 on Windows XP.
On my document, the main heading is in a frame with a fill of 'None'. The heading text has a bevel and emboss. The text frame sits on a background A4 frame which is filled with a Pantone spot colour.
When I print the cover page, the color filling the text frame is slightly different from the background Pantone color, even though the text frame has no color fill.
When I checked the document before printing in View>Overprint Preview, it appeared to be fine. The PDF also looked fine. In both situations, I could not discern a color difference but it is there in the printed document.
To provide a color behind the text which matches the fill color of the frame occupying the whole page, what should I do? My gut feel is to select the background frame and the text frame and check the knockout box on the effects panel or something like that.
I hope I have explained sufficiently clearly the problem I am experiencing.
Look forward to hearing your suggestions.
Thanks
Frank

http://indesignsecrets.com/eliminating-ydb-yucky-discolored-box-syndrome.php

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    public int[] obtainChannels()
    {//returns the array of choosen channels
    return c;
    public int isDone()
    {//returns if the user is finsihed
    if(done)
    return 1;
    else
    return 0;
    private void jbInit() throws Exception
    {//sets the layout for the frame
    this.setLayout(null);
    this.setTitle("Select Channels");
    for(int j = 0; j < channels; j++)
    checkbox[j] = new Checkbox();
    checkbox[0].setBackground(new java.awt.Color(0, 200, 250));
    checkbox[0].setBounds(new Rectangle(64, 55, 198, 20));
    checkbox[0].setLabel("sinwave");
    checkbox[1].setBackground(new java.awt.Color(0, 200, 250));
    checkbox[1].setBounds(new Rectangle(64, 133, 198, 20));
    checkbox[1].setLabel("squarewave");
    checkbox[2].setBackground(new java.awt.Color(0, 200, 250));
    checkbox[2].setBounds(new Rectangle(64, 211, 142, 30));
    checkbox[2].setLabel("coolant temp");
    checkbox[3].setBackground(new java.awt.Color(0, 200, 250));
    checkbox[3].setBounds(new Rectangle(64, 289, 198, 20));
    checkbox[3].setLabel("No signal1");
    checkbox[4].setBackground(new java.awt.Color(0, 200, 250));
    checkbox[4].setBounds(new Rectangle(356, 55, 198, 20));
    checkbox[4].setLabel("No signal2");
    checkbox[5].setBackground(new java.awt.Color(0, 200, 250));
    checkbox[5].setBounds(new Rectangle(356, 133, 198, 20));
    checkbox[5].setLabel("No signal3");
    checkbox[6].setBackground(new java.awt.Color(0, 200, 250));
    checkbox[6].setBounds(new Rectangle(356, 211, 198, 20));
    checkbox[6].setLabel("No signal4");
    checkbox[7].setBackground(new java.awt.Color(0, 200, 250));
    checkbox[7].setBounds(new Rectangle(356, 289, 198, 20));
    checkbox[7].setLabel("No signal5");
    this.setBackground(new java.awt.Color(0, 200, 250));
    button1.setBounds(new Rectangle(235, 477, 98, 30));
    button1.setLabel("OK");
    button1.addActionListener(this);//new java.awt.event.ActionListener()
    public void actionPerformed(ActionEvent e)
    button1_actionPerformed(e);
    */ this.add(checkbox[0], null);
    this.add(checkbox[5], null);
    this.add(checkbox[6], null);
    this.add(checkbox[1], null);
    this.add(checkbox[7], null);
    this.add(checkbox[2], null);
    this.add(checkbox[3], null);
    this.add(checkbox[4], null);
    this.add(button1, null);
    this.setSize(610,527);
    this.setVisible(true);
    this.toFront();
    public void actionPerformed(ActionEvent e)
    {//populates the array of choosen channels
    Object source = e.getSource();
    if(source == button1)
    for(int i = 0; i < channels; i++)
    if(checkbox.getState())
    c[i] = 1;
    else
    c[i] = 0;
    done = true;
    and this is where i instantiate it and call some of it's methods.
    /* Setup channel selections */
    channel_select = new channelSelect();
    while(channel_select.isDone() == 0)
    { //wait for the channel selection to occur
    channels = channel_select.obtainChannels();
    channel_select.dispose();
    channel_select = null;
    setChannels();

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