Updated apps won't sync to my mac iTunes

Hey Guys,
I have recently updated my MBP to a MBP retina and I used to be able to auto sync all the apps that I update on my iPhone 5s or iPod 5th gen or iPad air to my iTunes but ever since i started using MBP retina it won’t work anymore. I can’t possibly download the same apps on each device just because the updated apps won’t sync to my iTunes, I used to do all the updates on one device and then sync everything to my iTunes and then sync my other devices to my iTunes and then I would have the same updated apps on each device and in my iTunes,
Could someone please help me?
I’m going crazy here…

You might try Resetting All Settings, Settings > General > Reset > Reset All Settings and then reset as a new phone.
This will not erase any of your content but it sets the phone back to factory defaults on everything.
Worst case you may need to restore the phone form iTunes as a new phone and then restore from a back up to get your content back on your phone.

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