Urgent! Help! Mail wants to import all my messages!

For some reason, Mail just quit. WHen I restart, it says it needs to "import all your messages. This may take a few minutes." My mail is an IMAP account synced with Gmail and it contains over a hundred thousand messages. This happened once before and if I remember rightly it took not minutes but A DAY AND A HALF to import my messages.
Can they really all have been deleted?  WHy would it suddenly need to import messages that I never deleted? I do all my business through Mail, I can't have this happening. Surely there's a way to find that the messages are still there?
Does anyone know how to fix this?

It's caused by a corrupt index file that has to be rebuilt. If this is happening repeatedly, you may have some corrupt messages, or you may have installed a third-party system modification that interferes with Mail.
Back up all data.
1. Triple-click the line below on this page to select it:  
~/Library/Mail/Bundles
Right-click or control-click the highlighted line and select 
Services ▹ Open
from the contextual menu. A folder may open, or you may get an error message that the item can't be found. Either result is normal. If the folder does open and has contents, move the contents to the Desktop. Relaunch Mail and test. If there's no change, put the contents of the folder back and quit Mail again.
2. Repeat with this line:
/Library/Mail/Bundles
This time you may be prompted for your login password when you remove the items. Make sure they're removed from the folder and not just copied to the Desktop. If necessary, copy them first and then move the originals to the Trash.

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