URGENT HELP NEEDED (Bios Settings Failed)

Hey Guys,
I am having problems with my MSI Board, and don't know what to do.  I am very much a noob to BIOS/and modding so I apologize in advance.  You guys helped me a few months ago getting everything up and running and all was great for months.  Then last night I walked away from my PC for a while and when i came back a starting screen was on saying my OC Settings Failed to load, i tried other versions I saved and they all failed as well.  I ended up loading failsafe options, and got the "double start" where the computer turns on, then instantly shuts off, then turns on again.  This allowed me to load windows 7, which then started to "install updates".   So i think while i was away Windows automatically updated and rebooted... but would that effect my BIOS settings?
As I said, I had my system running perfect for months no errors or crashes at all based on the Bios setting you guys help me with in this thread:  https://forum-en.msi.com/index.php?topic=147854.0
However, last week I removed the heat sink and installed this cooler:  http://www.newegg.com/Product/Product.aspx?Item=N82E16835181010&nm_mc=OTC-Froogle&cm_mmc=OTC-Froogle-_-Water+Cooling-_-Corsair-_-35181010
All I did was unhook everything from the MB, install the cooler, and then hook everything back up to the MB.  The only thing I may have done wrong is not connect the SATA devices (my HDs and ROMS) back in the spots they were in originally.  However after I installed the cooler, they system booted right up, and I haven’t had any problems with my system for the past two weeks.  I also should note I didnt make any BIOS changes either after I installed the cooler.  So I don’t know if I should have done something there.   Yet, like I said the system has been fine for the past two weeks, no crashes or errors... it wasn’t until last night after Windows auto updated that this has begun.
The reason I need "URGENT HELP" is because of course I just a new job with deadlines due and so much video editing work I need to do.  I would be fine leaving it on failsafe settings, and forgetting the OC setting all together if I new that would make the system stable.  But considering its still doing the "double start" even in failsafe mode, im afraid if i start working my system will crash.
So I am begging anybody for any advice or help they could provide.  I will provide my system info below.  If anybody can guide me as to what settings I should set in BIOS i would appreciate it.  Or perhaps there’s a BIOS update that I should use now that I have a cooler and not a heat sink?  If you need any more information from me, just ask.  I will be monitoring this thread all day, as I desperately need help.
MY SYSTEM: 
Intel 980X chip running Win 7 64bit (with MSI BigBang xPower MB installed in my old Dell XPS 730X)
(1) SATA II WD 3gb Hard Drive @ 1.5TB
(2) OCZ SATA II SSD drives @120GB: http://www.newegg.com/Product/Product.aspx?Item=N82E16820227543
(2) Hitachi 6gb SATA III drives @2TB: http://www.newegg.com/Product/Product.aspx?Item=N82E16822145473
3 DVD/CD/BLUERAY DRIVES:
1 SATA DVD DRIVE
1 SATA BlueRay Drive
1 SATA CD Drive
(So 8 SATA Devices Total)
24GIGs of this ram: http://www.newegg.com/Product/Product.aspx?Item=N82E16820145321
1 NVida Geforce GTX 470
1 Soundblaster X-Fi Titanum Card
New Addition Water Cooler:  http://www.newegg.com/Product/Product.aspx?Item=N82E16835181010&nm_mc=OTC-Froogle&cm_mmc=OTC-Froogle-_-Water+Cooling-_-Corsair-_-35181010 

PROBLEM:  My OC BIOS setting wont load.  Even on failsafe i get the "double start".  I want to get back to my OC (stable) settings.
UPDATE:  Since I posted somebody messaged me mentioned I should have "reset the CMOS" after I installed the new cooler.  So I did that, and now they system starts fine without the "double start".  I am able to load one of my saved OC settings now as well (but any others causes a failure).
NEW QUESTIONS: 
      1.  Since I reset the CMOS and now the system is starting fine on my last OC settings, is it safe to assume the sytem is stable for now? 
      2.  I never made any power changes or BIOS changes after I installed the new cooler.  Should I have?
      3.  After I reset the CMOS was I soupposed to reinstall the drivers from the MSI disk again?  I did not, and the system seems to be fine, but I thought I was soupposed to do that after a CMOS reset.
      4.  Is there a new BIOS version for my setup that may be better now?   Im currently on v1.5
Here is a screenshot from CPUZ of the system information currently.  This is with it booting normally after my CMOS reboot.  I just figured id post it incase it helps with any of my questions.  Thanks so much for helping guys!

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