USB Hard Drive Size Limit

Is there a TB size limit for external HDDs connected via USB on a mac?
I have both a 3 TB and 4TB external 3.5" drive that will not mount via USB. They are currently connecting via a hdd dock (with USB 3, FW, and ESATA ports) to a 2009 Mac Pro running latest version of Yosemite. They will however mount via esata, the internal sata drive bay and FireWire. Also, it seems that smaller sized HDDs ~1TB and under will mount (I haven't tried 2TB since I don't have one available, but I suspect it will work).
Note that this is not exclusive to the 2009 Mac Pro as I have tried it on the newest Mac Pro Cylinder and got the same results via USB 3. I found this was an issue in Mavericks too and tried Snow Leopard on an old iMac with the same result.
When I inspect the disk in disk utility via USB disk utility reads that the HDD is MBR when I know that it is GPT (GUID) and all the other connections read this correctly.
Any insight into this?
Thanks.

One of the drives is (connected via USB3...  )
Drives are drives, and SATA. Know what you meant.
Some people have taken their internal drives, put in a USB device, formats properly, then return to use internally where the full capacity is seen and not an issue.
Why is DU treating internal drives on the SATA controller used an issue? really strange - and bad. But then Apple Pro RAID controller also limited drives to 2.2TB and would format as 800GB otherwise if they were larger.
Still points to the drive  case.
And in using 3rd party PCIe USB3 controller, that could play a role as well.

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