Used Rebuild and Lost Mail

I USED REBUILD ON ONE OF MY EMAIL ACCOUNTS AND NOW ONLY HAVE SIX EMAILS SHOWING UP OUT OF OVER 300 THAT WAS THERE.
IS THERE A WAY TO RETRIEVE THEM?
I HAVE A POP EMAIL ACCOUNT RUNNING TIGER 10.4.7.
THANK YOU FOR ANY HELP.
POWER MAC QUICKSILVER Mac OS X (10.4.7)

Larry,
Unfortunately, this can get a bit tedious, and detailed, but it is very likely all the messages are still there, it is merely an indexing problem. However, issues following conversion from an earlier version of Mail, can complicate working to get Mail to reindex.
Since you have converted from an earlier version of Mail, you probably have issues arising out of leftover files, and conversion to Tiger and Mail 2.x. Also, the mbox file is not used in Mail 2.x, and any found is a leftover file.
I want you to read the article at the link below, and then perhaps get back to me with some observations, before attempting any changes:
http://docs.info.apple.com/article.html?artnum=301315
This issue of leftover files applies not only to mailboxes you have previously created (which are in the Mailboxes folder the article mentioned) but will also apply to those mailboxes in account folders created prior to the upgrade to Tiger.
In a pre-conversion to Tiger mailbox, the only file that really mattered, in regard to message content, was the file "mbox". In a mailbox properly created and established in Tiger, the only thing that really matters is the folder named Messages.
Thus, if you are able to compare the size of both the mbox file and the Messages folder, at the time of conversion (a mailbox trying to have it both ways), and they are approximately the same size, then you can reasonably conclude everything was converted. There are some very minor exceptions to this comparative analysis, but it basically holds.
The path to the Mail folder is Home/Library/Mail -- within the Mail folder are one or more account folders and the Mailboxes folder.
There are numerous topics about issues surrounding conversion of mailboxes to Tiger and Mail 2.x, from earlier versions. One of them -- the lengthy topic at the link below -- may also be of assistance, and deals with the Envelope Index to some extent:
http://discussions.apple.com/thread.jspa?threadID=413196
Let me know any questions, and if needed, post back for specific instructions, and help after you have thoroughly investigated your Mail folder, and mailboxes, and the degree of conversion that may not have been completed. If you think you have all messages displaying, that you expect to (except for the search issue), then simply removing all unneeded files may the route to go.
Once all leftover files are removed, the at the root level of the original Mail folder, locate the Envelope Index file, and delete it -- if more than one file has Envelope in the name, delete those as well.
Relaunch Mail, which will announce that it is ready to import your mailboxes -- allow this to continue, and in your case, it will really only be reindexing all your mailboxes, and not importing any.
This will refresh this all-encompassing index file, and I think the the disappearing messages will be resolved.
Ernie

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