Weird permission problems after 10.5.7 update

I'm not sure if this is the best place to post this but since the update, it appears my Firewire ports have been fried and I have lost three Lacie external drives. They WILL mount on my Macbook Pro running Tiger but my PPC which is my main compute will not see them at all.
When I ran repair disk permissions again just now, I got a bunch of normal repairs for Quicktime, iTunes, etc. but these were at the end and I never saw anything like this.
Any idea what this means?
Warning: SUID file "System/Library/Filesystems/AppleShare/afpLoad" has been modified and will not be repaired.
Warning: SUID file "System/Library/PrivateFrameworks/DiskManagement.framework/Versions/A/Resources /DiskManagementTool" has been modified and will not be repaired.
Warning: SUID file "sbin/umount" has been modified and will not be repaired.
Warning: SUID file "bin/rcp" has been modified and will not be repaired.
Warning: SUID file "usr/bin/quota" has been modified and will not be repaired.
Warning: SUID file "usr/bin/rlogin" has been modified and will not be repaired.
Warning: SUID file "usr/bin/rsh" has been modified and will not be repaired.

You can ignore these.
http://support.apple.com/kb/TS1448

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Permission problems after upgrade to 10.5 on early Power PC G5 Tower

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We have read through the forums regarding permission problems after upgrading and even tried some tips found here.

You really should check things out first before speaking.
Here are the requirements for 10.5;
Mac OS X v10.5 Leopard requires:
A Mac computer with an Intel, PowerPC G5, or Power PC G4 (867 MHz or faster) processor
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A DVD drive for installation
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Hello everyone, we are having a problem with searching shares mounted on clients from a server.
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Searching problem after 10.5.6 Update
Posted on: 8-jan-2009 18:32, by user: mike allen2 -- Relevance: 100% -- Show all results within this thread
Hello everyone, we are having a problem with searching shares mounted on clients from a server.
Prior to 10.5.6 we could search an entire share as well as folders in the share. After 10.5.6 we can't search the share and we can only search folders in the share.
10.5 that are also seeing this problem or would upgrading the server fix this search issue
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Posted on: 18-dec-2008 15:49, by user: jshock -- Relevance: 89% -- Show all results within this thread
on the other machines that didn't update to 10.5.6. They are able to search all shares. My 10.5.6 machine can only search localhost and Jukebox ...I ran mdutil on the 10.5.6 machine, here are the results:
$ mdutil -s /Volumes/*
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Re: 10.5.6 Update-DOES NOT SEARCH ANYMORE
Posted on: 9-jan-2009 20:43, by user: Difhockey_68 -- Relevance: 89% -- Show all results within this thread
Same problem here, upgraded to 10.5.6 and cannot search our apple server running tiger. Windows shares on 2003 server works fine. Will an upgrade of our Apple server to Leopard solve this issue? Is there an easy way to "uninstall" 10.5.6 without reinstalling the computer
Since upgrading to 10.5.6 I can't search my network servers
Posted on: 14-jan-2009 22:24, by user: gridout1959 -- Relevance: 84% -- Show all results within this thread
Hi all...
I recently installed the 10.5.6 OS upgrade and I've encountered a problem. I can no longer search my network attached servers - there is no search activity of any kind when I type in search terms. My local search works fine...I just can't search anything on my network ... windows servers. Is there a compatibilty issue between OS X 10.5.6 and Extreme Z-IP? Any helpful tips
Updated to 10.5.6, no longer able to search through networked shares
Posted on: 30-dec-2008 16:46, by user: Sigops -- Relevance: 84% -- Show all results within this thread
One of our users was able to search through our network shares(extreemeZ-ip) just fine yesterday morning, mid morning he updated to 10.5.6 and is no longer able to use finder to perform searches on those shares
Mac OS 10.5.6 clients can no longer search Mac OS 10.4.11 share points
Posted on: 8-jan-2009 18:52, by user: rayvid -- Relevance: 71% -- Show all results within this thread
After upgrading our workstations from Mac OS 10.5.5 to 10.5.6, we no longer receive Finder search results from our file server that runs Mac OS X Server v.10.4.11.
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hi.
I contacted Sony about the Bluetooth / Wireless problem after the 4.3 update, eventually all I got back was that they're aware of the problems (Bluetooth) and are working on it for the next update. How long this will take is anyones guess.
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Permission problem after latest update, computer can't shut shown

after the latest update on Itunes and quicktime, my computer can't be shut down properly. I have to press the power button for long and force it to be shut down.
After checking the permission, I find that there are looooots of permission problems. I don't know how to do with them:
Started verify/repair permissions on disk disk0s2 Macintosh HD
Permissions differ on "System/Library/Frameworks/CoreVideo.framework/Versions/A/CodeResources", should be -rw-r--r-- , they are lrwxr-xr-x
Permissions differ on "private/var/log/secure.log", should be -rw------- , they are -rw-r-----
Permissions differ on "System/Library/Components/CoreMediaAuthoringPrivateComponents.component/Conten ts/CodeResources", should be -rw-r--r-- , they are lrwxr-xr-x
Permissions differ on "System/Library/PrivateFrameworks/CoreMediaAuthoringPrivate.framework/Versions/ A/CodeResources", should be -rw-r--r-- , they are lrwxr-xr-x
Permissions differ on "System/Library/PrivateFrameworks/CoreMediaIOServicesPrivate.framework/Versions /A/CodeResources", should be -rw-r--r-- , they are lrwxr-xr-x
Permissions differ on "System/Library/PrivateFrameworks/CoreMediaIOServicesPrivate.framework/Versions /A/Resources/AVC.plugin/Contents/CodeResources", should be -rw-r--r-- , they are lrwxr-xr-x
Permissions differ on "System/Library/PrivateFrameworks/CoreMediaIOServicesPrivate.framework/Versions /A/Resources/IIDC.plugin/Contents/CodeResources", should be -rw-r--r-- , they are lrwxr-xr-x
Permissions differ on "System/Library/PrivateFrameworks/CoreMediaIOServicesPrivate.framework/Versions /A/Resources/MPEGAudioDecoder.component/Contents/CodeResources", should be -rw-r--r-- , they are lrwxr-xr-x
Permissions differ on "System/Library/PrivateFrameworks/CoreMediaIOServicesPrivate.framework/Versions /A/Resources/MPEGLayer2AudioEncoder.component/Contents/CodeResources", should be -rw-r--r-- , they are lrwxr-xr-x
Permissions differ on "System/Library/PrivateFrameworks/CoreMediaIOServicesPrivate.framework/Versions /A/Resources/Tundra.component/Contents/CodeResources", should be -rw-r--r-- , they are lrwxr-xr-x
Permissions differ on "System/Library/PrivateFrameworks/CoreMediaIOServicesPrivate.framework/Versions /A/Resources/VDC.plugin/Contents/CodeResources", should be -rw-r--r-- , they are lrwxr-xr-x
Permissions differ on "System/Library/PrivateFrameworks/CoreMediaPrivate.framework/Versions/A/CodeRes ources", should be -rw-r--r-- , they are lrwxr-xr-x
Permissions differ on "Applications/QuickTime Player.app/Contents/CodeResources", should be -rw-rw-r-- , they are lrwxr-xr-x
Permissions differ on "Applications/QuickTime Player.app/Contents/PlugIns/AnnotationInspector.propPane/Contents/CodeResources ", should be -rw-rw-r-- , they are lrwxr-xr-x
Permissions differ on "Applications/QuickTime Player.app/Contents/PlugIns/AudioSettingsInspector.propPane/Contents/CodeResour ces", should be -rw-rw-r-- , they are lrwxr-xr-x
Permissions differ on "Applications/QuickTime Player.app/Contents/PlugIns/DataRefInspector.propPane/Contents/CodeResources", should be -rw-rw-r-- , they are lrwxr-xr-x
Permissions differ on "Applications/QuickTime Player.app/Contents/PlugIns/HintTrackInspector.propPane/Contents/CodeResources" , should be -rw-rw-r-- , they are lrwxr-xr-x
Permissions differ on "Applications/QuickTime Player.app/Contents/PlugIns/NetworkInspector.propPane/Contents/CodeResources", should be -rw-rw-r-- , they are lrwxr-xr-x
Permissions differ on "Applications/QuickTime Player.app/Contents/PlugIns/SettingsInspector.propPane/Contents/CodeResources", should be -rw-rw-r-- , they are lrwxr-xr-x
Permissions differ on "Applications/QuickTime Player.app/Contents/PlugIns/VisualTrackInspector.propPane/Contents/CodeResource s", should be -rw-rw-r-- , they are lrwxr-xr-x
Permissions differ on "System/Library/QuickTime/QuickTimeComponents.component/Contents/CodeResources" , should be -rw-r--r-- , they are lrwxr-xr-x
Permissions differ on "System/Library/QuickTimeJava/QuickTimeJava.bundle/Contents/CodeResources", should be -rw-r--r-- , they are lrwxr-xr-x
Permissions differ on "System/Library/QuickTime/QuickTime3GPP.component/Contents/CodeResources", should be -rw-r--r-- , they are lrwxr-xr-x
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Permissions differ on "System/Library/QuickTime/QuickTimeIIDCDigitizer.component/Contents/CodeResourc es", should be -rw-r--r-- , they are lrwxr-xr-x
Permissions differ on "System/Library/QuickTime/QuickTimeImporters.component/Contents/CodeResources", should be -rw-r--r-- , they are lrwxr-xr-x
Permissions differ on "System/Library/QuickTime/QuickTimeMPEG.component/Contents/CodeResources", should be -rw-r--r-- , they are lrwxr-xr-x
Permissions differ on "System/Library/QuickTime/QuickTimeMPEG4.component/Contents/CodeResources", should be -rw-r--r-- , they are lrwxr-xr-x
Permissions differ on "System/Library/QuickTime/QuickTimeStreaming.component/Contents/CodeResources", should be -rw-r--r-- , they are lrwxr-xr-x
Permissions differ on "System/Library/QuickTime/QuickTimeVR.component/Contents/CodeResources", should be -rw-r--r-- , they are lrwxr-xr-x
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Permissions differ on "Library/Internet Plug-Ins/QuickTime Plugin.webplugin/Contents/CodeResources", should be -rw-rw-r-- , they are lrwxr-xr-x
Permissions differ on "System/Library/Frameworks/QTKit.framework/Versions/A/Resources/QTKitIBPlugin.i bplugin/Contents/CodeResources", should be -rw-r--r-- , they are lrwxr-xr-x
Permissions differ on "System/Library/Spotlight/QuickTime.mdimporter/Contents/CodeResources", should be -rw-r--r-- , they are lrwxr-xr-x
Permissions differ on "Library/Audio/Plug-Ins/HAL/iSightAudio.plugin/Contents/CodeResources", should be -rw-rw-r-- , they are lrwxr-xr-x
Permissions differ on "System/Library/Frameworks/QuickTime.framework/Versions/A/CodeResources", should be -rw-r--r-- , they are lrwxr-xr-x
Permissions differ on "System/Library/PreferencePanes/QuickTime.prefPane/Contents/CodeResources", should be -rw-r--r-- , they are lrwxr-xr-x
Permissions differ on "System/Library/PreferencePanes/QuickTime.prefPane/Contents/Resources/QTAdvance d.prefPane/Contents/CodeResources", should be -rw-r--r-- , they are lrwxr-xr-x
Permissions differ on "System/Library/PreferencePanes/QuickTime.prefPane/Contents/Resources/QTAdvance d.prefPane/Contents/Resources/QTMediaKeys.bundle/Contents/CodeResources", should be -rw-r--r-- , they are lrwxr-xr-x
Permissions differ on "System/Library/PreferencePanes/QuickTime.prefPane/Contents/Resources/QTAdvance d.prefPane/Contents/Resources/QTMime.bundle/Contents/CodeResources", should be -rw-r--r-- , they are lrwxr-xr-x
Permissions differ on "System/Library/PreferencePanes/QuickTime.prefPane/Contents/Resources/QTAdvance d.prefPane/Contents/Resources/QTTransport.bundle/Contents/CodeResources", should be -rw-r--r-- , they are lrwxr-xr-x
Permissions differ on "System/Library/PreferencePanes/QuickTime.prefPane/Contents/Resources/QTPlugIn. prefPane/Contents/CodeResources", should be -rw-r--r-- , they are lrwxr-xr-x
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Permissions differ on "System/Library/PreferencePanes/QuickTime.prefPane/Contents/Resources/QTRegiste r.prefPane/Contents/Resources/QTAbout.bundle/Contents/CodeResources", should be -rw-r--r-- , they are lrwxr-xr-x
Permissions differ on "System/Library/PreferencePanes/QuickTime.prefPane/Contents/Resources/QTStreami ng.prefPane/Contents/CodeResources", should be -rw-r--r-- , they are lrwxr-xr-x
Permissions differ on "System/Library/PreferencePanes/QuickTime.prefPane/Contents/Resources/QTUpdate. prefPane/Contents/CodeResources", should be -rw-r--r-- , they are lrwxr-xr-x
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Permissions differ on "Applications/iTunes.app/Contents/Frameworks/InternetUtilities.bundle/Contents/ CodeResources", should be -rw-rw-r-- , they are lrwxr-xr-x
Permissions differ on "Applications/iTunes.app/Contents/Resources/iTunesHelper.app/Contents/CodeResou rces", should be -rw-rw-r-- , they are lrwxr-xr-x
Permissions differ on "System/Library/Components/AudioCodecs.component/Contents/CodeResources", should be -rw-r--r-- , they are lrwxr-xr-x
Permissions differ on "System/Library/PrivateFrameworks/CoreAUC.framework/Versions/A/CodeResources", should be -rw-r--r-- , they are lrwxr-xr-x
Finished verify/repair permissions on disk disk0s2 Macintosh HD

Ok...
*"worst of all, my macbook is not working properly. Ever since the latest update of itunes 8.2 and Quicktime, I can never shut it down properly. I have to press the power button until it is forced to be shut down."*
Try resetting the SMC. http://support.apple.com/kb/HT1411
If you still can't shut down from the Apple Menu, try resetting the PRAM/NRAM, instructions here.
http://support.apple.com/kb/HT1379
Are you running anti virus software???

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Hi - After updating to 10.7.5 I have found my sleepwatcher sleep script which runs osascript times out with a PM Timeout.
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It appears that this is not an uncommon problem:
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It appears that this is not an uncommon problem:
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