Where are the guidelines for how to interface customized data acquisition equipment to LabVIEW?

I have a need to do some very specialized data acquisition that may require building special hardware. I would still like to use LabVIEW as the front end and perhaps even carry portions of the interface over into the final product. However, I cannot find the documentation. Where is that kept? I have seen references to a number of generic protocols, without any links back to the details, that may be suitable. The data is high bandwidth, but bursty with sampling rates up to 40 MHz and events that last about 100 milliseconds. Can anyone recommend which of the various methods would best suit this application?
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Once you have figured out your communication bus, it is just a matter of how to format your commands and data.  You will need to do this regardless of programming language you choose.  Formating the data is quite simple in LabVIEW.  You just have to write the data to the right thing.
Quickly based on the limited parameters you have given us, I would go with an Ethernet connection.  I'm not completely sure if the Ethernet bus will be able to handle your bandwidth, though.  If not, then you will need to go to a PCIe or PXIe connection.
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