Why don't all applications show up in application switcher?

I've got about 8 apps running on my Mac Pro running the latest version of Snow Leopard, doing my usual thing, uploading a file with Filezilla, tracking expenses in Quicken Essentials, viewing changes in the weather with WeatherDock, managing fonts in LinoType Font Explorer, surfing in Firefox, making edits in TextEdit and running MagicJack for my home phone. When I tried to use the application switcher (command tab) to see my open apps and check on my file upload, Filezilla and most of my other apps don't show up (only WeatherDocl, Font Explorer and MagicJack). Hovering over the dock, those same apps do not show the white glowing ball under the icon to show they're active, but they ARE open and running. Force Quit sees them all. This is a weird development. Anyone else seen this? I would restart, but I don't want to suspend my uploading file.

If Facebook have support page or forum you would perhaps get answers there.
I don't use Facebook so that's about the best advice I can give.

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