Will my Bootcamp Windows Install Remain after SSD Install

I currently have a i5 Mac Mini 5.1 with the standard 500gb hard drive installed. Presently the drive is split as 340gb for OSX and 160gb for Windows 8.1 running under Bootcamp. My plan is to install a 250gb SSD in addition to the original 500gb HDD onto which I will clone over my current OSX install, then format the 340gb partition onto which I will then move over my home folder and files whilst keeping the SSD for OSX and applications for optimum performance. My plan is to leave the Bootcamp partition as it is.
My question is will the 160gb Windows 8.1 Bootcamp partition still work or will I have to wipe that partition and start again by re-bootcamping my mac?
Any help and advice is greatly appreciated.
John

Hi Bobthefisherman
Thanks for the reply. That's a real pain having to have them on the same drive as I was hoping to keep the SSD purely for OSX and its applications.
Thanks
John

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    These libraries contain the missing audiobooks and music, or at least appear to.  I haven't crosschecked to see that everything is there.  I wonder why I have this data there?  I don't see a place in iTunes to configure it to look there.

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