Will saving an eps file as a pdf change color output?  Digital printing.

Hello, I recently sent in a reprint order of a client's package label file, and the color output is quite different.   The first times I ordered these labels, I sent in an eps file.  At the printer's request, I submitted the file as a pdf this time.  I can't see any differences bewteen the eps and pdf  files.   They're both RGB, the color values are sttill the same in the file.   Should the file type change result in such a different output?  Thanks for any advice...

Switching from a RGB color mode to CMYK gives the same colors on Screen? Since the CMYK is a subset of the colors available in RGB this is not usually the case.
RGB color
CMYK color

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