With holding line items are not picking up while clearing with F-44 (DP)

Hi Friends,
I hope you resolve my problem.
I have a problem with With holding tax line items. Please see below for more details.
1. Made advance payment to Vendors through F-48
Vendor a/c dr 200,000
    To Bank a/c 196000
    To TDS a/c      4000
2. Raised Vendor invoice through F-43
Expence a/c dr    50000
    To Vendor a/c    49000
    To TDS Payable   1000
3. Cleared Vendor invoice against the Down payment
39A Vendor a/c dr 50000
26 Vendor a/c 49000
40 TDS Payable 1000
While i am tryi ng to do the above invoice with WHT clearing, the system is saying that " With holding tax information is ignored"
The entry while clearing Vendor DP is
37 Vendor   a/c  dr 49000
27  Vendor a/c   49000
I have every seeting in the system
1. Tax types, codes, Vendor master, FSG, FBKP, and posting key settings. All are looking fine
Please help me how to clear the WHT automatically without manual intervention.
Kindly correct me where ever u see mistakes
Thank you so much for your advance help
Regards,
Narasim

Hello Ray,
I am very happy that some have taken tthe responsilibility of answering my query.
When i do the F-54, I am able to clear the vendor invoice against with the down payment. But if i go and see the WHT in respective GL account, they are still showing as " Open".
Please help me how to resolve it.
If this is not the correct way, kindly suggest me the right way.
Thanks for all your help
Regards,
Narasim

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