X58-PRO-E, RAM is not recognized

I am assembling an X-58 PRO-E, I7-920, RAM Kingston 3x KHX1600C8D3K2/4GX, (6 chips), Diamond 5770, ps Antec Quattro 1000, case Antec 900, 3 x Hitachi 1TB SATA in RAID 5
On boot up it shows only 4GB, should show 12GB, WIN 7 x64 shows 4GB, MSI Overclock tools shows all 6 chips and 12GB,  BIOS @ 870 in bios it shows 4GB, in MemoryZ it shows 12GB and all 6 chips, they all look identical.
Swapping the RAM to all different slots does not change the results
Booting with any combination of 3 chips shows 2GB of RAM installed
Is this:
A compatibility issues with the RAM ?
B defective mobo ?
C some other issue ?
Thanks,

Default memory speed is 1066. With BIOS version A7522IMS.870. the motherboard will post with the memory at 1333 & 1600. 
You may be on the right track, the memory may not be compatible, although it does seem that the packages of 1, 2, or 3 chips all contain the same chips just a differnet quantity.
Kingston does not list 1600 speed chips as compatible
Kingston lists the following memory as compatible:
http://www.ec.kingston.com/ecom/configurator_new/modelsinfo.asp?SysID=57358&mfr=MSI&model=X58+Pro&search_type=&root=us&LinkBack=http%3A%2F%2Fwww.kingston.com&Sys=57358-MSI-X58+Pro-E+Motherboard&distributor=0&submit1=Search
Memory upgrades:
KVR1066D3N7/1G 1GB 1066MHz DDR3 Non-ECC CL7 DIMM 
KVR1066D3N7/2G 2GB 1066MHz DDR3 Non-ECC CL7 DIMM
KVR1066D3N7/4G 4GB 1066MHz DDR3 Non-ECC CL7 DIMM
KVR1066D3N7K2/2G 2GB 1066MHz DDR3 Non-ECC CL7 DIMM (Kit of 2)
KVR1066D3N7K2/4G 4GB 1066MHz DDR3 Non-ECC CL7 DIMM (Kit of 2)
KVR1066D3N7K2/8G 8GB 1066MHz DDR3 Non-ECC CL7 DIMM (Kit of 2)
KVR1066D3N7K3/3G 3GB 1066MHz DDR3 Non-ECC CL7 DIMM (Kit of 3)
KVR1066D3N7K3/6G 6GB 1066MHz DDR3 Non-ECC CL7 DIMM (Kit of 3)
KVR1066D3N7K3/12G 12GB 1066MHz DDR3 Non-ECC CL7 DIMM (Kit of 3)
KVR1333D3N9/1G 1GB 1333MHz DDR3 Non-ECC CL9 DIMM
KVR1333D3N9/2G 2GB 1333MHz DDR3 Non-ECC CL9 DIMM
KVR1333D3N9/4G 4GB 1333MHz DDR3 Non-ECC CL9 DIMM
KVR1333D3N9K2/2G 2GB 1333MHz DDR3 Non-ECC CL9 DIMM (Kit of 2)
KVR1333D3N9K2/4G 4GB 1333MHz DDR3 Non-ECC CL9 DIMM (Kit of 2)
KVR1333D3N9K2/8G 8GB 1333MHz DDR3 Non-ECC CL9 DIMM (Kit of 2)
KVR1333D3N9K3/3G 3GB 1333MHz DDR3 Non-ECC CL9 DIMM (Kit of 3)
KVR1333D3N9K3/6G 6GB 1333MHz DDR3 Non-ECC CL9 DIMM (Kit of 3)
KVR1333D3N9K3/12G 12GB 1333MHz DDR3 Non-ECC CL9 DIMM (Kit of 3)

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