After the latest update I can no longer see my iPhone listed on the left column - how do you get to where you can pick

After the latest itunes update I can no longer see my iPhone listed on the left column. How can I get to the section where I can pick & choose apps etc to be synced?
Also I had to get a new iPhone & so I backed up the night before to the cloud & my computer. When I tried to restore from back up with the new phone my back up wasn't there - shouldn't it be automatic via wifi from the cloud?
What am I doing wrong?

Your iphone is shown at the top of the page.
You can also simply click View>Show Sidebar and it will look about the same as it did before.

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