Can't debug xilkernel application

Hello,
I have some very strange behaviour when moving from standalobe bsp to xilkernel bsp. I hope someone here will have ideas.
I created application+bsp based on standalone and another same application with bsp based on xilkernel.
The application is based on "peripheral test".
Tha first routine called by this application main()
is 
XUartNs550_SetBaud(u32 BaseAddress, u32 InputClockHz, u32 BaudRate) 
All I'm doing is adding some new lines inside the start of this routine.
With the standalone on doing step into, I get to the start command inside XUartNs550_SetBaud, but with the xilkernel I get to some other line, as if there is no synchronization between the source and the object.
I really don't understand why.
I've been trying these many times in both applications, but keep getting this strange behaviour.
Please help.
Regards,
Ran
 

Hi,
Trying again to debug, I have an spi test, and I see that it hangs  there.
1. When debugging it, on step into I get inside a function SpiFlashBulkErase()
But all backtrace dissapeared !
2. I've then tried to increats stack and heap size from 0x400 to 0x1000, but it didn;t change anything.
3. Trying to put breakpoing at the start of SpiFlashBulkErase() and then relaunch application, I get the following error:
These are quite strange and unexpected behaviour. With standalone, there was no such behaviour.
Maybe it is all related to some timer usage done by xilkernel ?
Thank for any idea,
Ran

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    Hi Iwan,
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    Creator Team

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