Caught in a time loop

After a hacker attack, wiped the machine (Intel Xserve) and installed Server 10.5 from disk. Got the "Welcome" screen and went through the setup process. Got the "configuring server" progress bar. When it finished, computer restarted and up comes the "Welcome" screen waiting for me to configure from scratch. Tried that once more, with the same result. What's going on here?

A little more: After running the setup we get "Configuring your server." Progress bar slides across in a couple of minutes, then hangs for about half an hour on the last 1/8 of an inch. Finally flashes an error message for a few seconds and restarts. Finally I stared at it for a half hour and got to see the error message:
"Back end tool saProxy crashed. Quit Server Assistant or the computer will restart in 15 seconds." (or whatever the initial number of seconds was)
Found the same problem in another thread at <http://discussions.apple.com/thread.jspa?messageID=8779101> with the same solution, to recreate .AppleSetupDone.
So two questions: 1. What the heck is saProxy supposed to do? A google search brings up a lot of Windows references.
2. What's the difference between /var/db/..AppleSetupDone and /private/var/db/AppleSetupDone as suggested in the other thread?
The first one worked, but as noted in the other thread, trashed the password.

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