Help - copying folders but not any files to my usb stick

ok, so i have a macbook pro with a solid state drive so too small to keep all my music on, as i have about 140 gigs of music and audiobooks etc. therefore i have been keping my files on my timecapsule.
however updating ipods is far too slow over wireless, so i bought a 256gig usb stick.
it takes 70 hours to transfer my files, however when it completes i have about 10-20 folders with files in and the rest are empty, any ideas?

Can you describe a bit more which steps you have taken so far? Also, exactly which USB device are you using? Has it worked for you before?
Regards,
Steve M.

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