Problem in Data extraction into BI

Hi Guys,
I am having a strange problem and unable to idenitfy the root cause. I am hoping that some one can help me with this issue.
System Details:
BI 7.0
SAP ECC 5.0
Current Design:
We have created a DSO in the BI system and created a custom extractor to pull the data from SAP ECC 5.0 into the DSO.
The custom extractor is using the option "Extraction Frm SAP Query" and using a custom infoset. This is the transaction type data source.
Problem Statement:
When I run the RSA3 transaction for this extractor, the extractor brings 1870 records. However when i run the Infopackage in the BI system to bring the records into the DSO --> PSA then i am only getting 823 records.
Question:
Why am i seeing this difference in the number of records in RSA3 and in the BI system? I am NOT using any selection or filter conditions in the Infopackage. And i am only getting the data till PSA. So i was expecting that in PSA i can see 1870 records same as that i see in RSA3. Any idea what is missing?
Thanks in advance !!

Hi,
The infopackage ran for full load and not for delta load.
I looked at the rsmo and at first glance everything looks fine. But when i look at the details tab i can see that the overall status shows as RED and it says
Overall Status: Errors occured: or : Missing Messages
I am not clear what this means. I dont see any other nodes in RED. Every node is in green except the top most node which is in RED and shows the above message.
Any idea what could be the problem?

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