Why not pop-up note in Ibooks ?

Why not pop-up note in Ibooks
in the OS X and iPad ?
inDesign CC 2014

I've moved your question to the InDesign EPUB forum since it appears to be an EPUB question.
What kind of popup note are you referring to you?
Have you updated to the latest InDesign CC 2014 update (2014.2, released February 2015)?
Are you exporting Reflowable or Fixed Layout EPUB?

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