How can I tell if signals from two devices are truly synchronised?

Hi there,
How does one check that signals from two devices (two separate devices in a single X-series chassis) that should be synchronised actually are?   I am using a PXIe6361 and PXIe4331 on a PXIe-1073, with Labview 2001 SP1 64-bit. All devices are using the Sample Clock from the 4331 device, and an AI Start Trigger, so they should be synchronised.
I thought that writing the signal data to file and checking the time stamp for each column of data would be the most accurate, but I have been told that timestamps are software created and therefore don't reflect the actual time that the signals were acquired by the hardware.  When I do this, the timestamps vary by up to 150ms which is larger than I expected.
If I set the x-axis of the waveform graphs (on the GUI) to "Time" then it appears that the first data sample is taken at different times for the two plots (one plot per device).
If I set the x-axis of the waveform graphs (on the GUI) to "Ignore time stamp" (so that the x-axis just starts from 0 rather than a date-time) then the first data point occurs at "0" for both graphs. However, I'm not sure that this reflects the actual alignment of the signal.
What is the best way to check if signals collected on different devices in the same chassis are actually synchronised?
Thanks,
Claire.

Hi Lynn,
Thanks for your help and for sending the demo.
I understand the concept of how the signals will look if they're not synchronised and your demo shows that nicely. I guess I have been perplexed by someone else telling me that the timestamps in the output file (and following from that I assume timestamps on a waveform graph) do not give an indication of whether signals are synchronised. The reason they gave for this was that the timestamps are manufactured by the software, not the DAQ hardware.  They suggested that I put the setting "ignore waveform timestamps" on my waveform graphs, and then check that both signals come in at the same time (i.e. both start at zero), but I'm not convinced about this. 
When I use an analog trigger, neither the timestamps in my output file or on the two waveform graphs are synchronised. If I don't use the trigger, then there is far less disparity in the timestamps in the output file. I've attached two output files here, and my VI.
This is my first attempt to synchronise a voltage module and a strain gauge module on an X-series chassis, so I want to make sure that I'm achieving the best synchronisation that I can, and the difference in behaviour with and without the trigger worries me.
Thanks,
Claire.
Attachments:
without trigger.txt ‏5 KB
with trigger.txt ‏6 KB
Multi-Device Synch-Analog Input-Finite Acq-Analog Start_Claire_wDigitalin_12June2012 PTbridge.vi ‏196 KB

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