Special characters are not shown in compare document report in Acrobat X

Hi All,
I have a pdf document which is having some special characters like üὄ. Now I have updated the document with few corrections and while compare document in Acrobat X special characters are not shown in the report.
Can any one please look into this and give suggestion.

Hi Steve,
Thanks for your reply.
Platform - PC
Application - 3B2 and Acrobat 9
So far we have seen this kind of issue in only one document. In the below screenshot you can see 2 pdf files, the right side one is my MS pdf and the left side one is the exported pdf from 3B2 application both the files having the special characters such as . I just did the text comparison however both and is missing in the exported pdf but the reports shown the changes for characters only wherever the charactes is missing the report not shown the changes properly(See highlighted in yellow).
Please let me know if you need more deatails.

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