Bootcamp booting issue (multiple OSX)

Just got done formatting and installing OSX SL (deleted Lion).  I installed OSX and installed all the updates for SL. 
Then I used bootcamp to set up a FAT partition for Win7 and proceeded to install Windows.
I used the Windows bootcamp setup application on my SL disc to install the bootcamp drivers and then updated from 3.0 to 3.1 to 3.2 and finally to 3.3
Finished setting up Windows the way I liked it and then used WinClone to create a backup IMG file.
I then booted back into OSX SL and set that up the way I liked (installed CS5, FCS3, Plugins, etc) and used CCC to create a recovery partition.
So now if I hold down the option key at boot I have Win7, SL and my SL recovery partition.
I have two issues.
1)  If I set SL as my startup partition and reboot it just hangs there with the grey Apple Logo screen.  Could this be because I have 2 SL partitons?  is it confused as which one to boot?
2) What is the best way to protect my newly created Recovery Partition?  Do I just set the permissions for all users/admins to "Read-Only"?  Is there a better way?
Thanks in advance for any input.

Christopher Murphy wrote:
Tell that to Apple. Boot Camp creates the partition for Windows as FAT32, and it's expected that you reformat it as NTFS. from within the Windows Installer.
I don't have to tell Apple anything. Read the documentation. You just repeated what the documentation says. And the documentation has pictures. I never said Boot Camp Assistant formats the partition to NTFS, I said to read (follow is implied) the documention, I also said Windows 7 requires the partition to be formatted NTFS. It is clear in the documentation how and when the partition is formated to NTFS. Pages 8-10 http://manuals.info.apple.com/en_US/Boot_Camp_Install-Setup_10.6.pdf.
The original poster said he used DU to partition the drive. He needs to use Boot Camp Assistant while following the Installation Guide.

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