Collection: (80004005) Execute: Query timed-out

Hi,
Recent days im facing a strange issue like the SCCM clients are not reporting the full Software inventory, so because of that we were unable to query using the software inventory details.
The strange part is, while checking the logs "Inventory agent.log" it states "Collection: (80004005) Execute: Query timed-out".
I wanna find what is the job of the Software inventory cycle and how to see at what point they stuck scanning...
Any information helping me to proceed further with my investigation would be much appreciated.
Thanks,
Nana

Thanks for the link Garth...
We have scheduled software inventory to run on Sundays so that it should not impact client PC's performance. I agree it takes long time, but at some point we might require some information from those files. I also tried to create few test machine, but its difficult
to duplicate this issue in them. Whenever we create a new machine, it reports good :(
I was querying the machines who has collected "powershell.exe" files using software inventory cycle, i was able to fetch about 91% of the machines where as 9% has not. I tried to run a powershell query (Full software inventory) remotely on the machine where
we are facing issues collecting software inventory. Monitoring the logs and i came up with this error.
Here my question would be as its working on most of the machines why aren't they good on the rest. Even if we try to re-install the client, same status. Maybe because of the machine performance?
Thanks for your help...

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    Have you timed how long the raw query takes to do directly on your SQL db? 
    Most likely you may need to setup some indices to use.  For offline sync, it will want to sort & filter by "__updatedAt" in addition to your filters.  So that
    is something to take in mind when optimizing your SQL performance.  

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