(cross post) Batch of two folders in...

I have two folders with image sequences. I would like to run a batch of some sort, which opens one file from each folder, copies one of the images into a new layer of the other, then saves the results to a new folder, and continues.
Is this possible? How?
ty
p.s. I am on Mac OSX Lion 10.7.2 with CS5

C. thanks again.
I found I can place the .jsx file into that scripts folder on my disk and then use "File > Scripts > Browse" to run it.
However, one image sequence is .png and the other is .tif, so will have to add some code, which I think I can do, to fix it.
Cheers
William
#target photoshop
var inputFolderA = Folder.selectDialog("Please select ImageA folder");  
var inputFolderB = Folder.selectDialog("Please select ImageB folder");  
var outputFolderE = Folder.selectDialog("Please select output Folder ImageE folder"); 
var fileList = inputFolderA.getFiles ("*.png");
var startRulerUnits = preferences.rulerUnits;
preferences.rulerUnits = Units.PIXELS;
for (var a = 0;a<fileList.length;a++){
          var file =fileList[a];
          var fileB = file.name.replace(/A/,"B");
          fileB = file.name.replace(/png/,"tif");
          var doc = open(file);
          var Bimage = File(inputFolderB +"/" + fileB);
          if(Bimage.exists) {
             var b = open(Bimage);
             activeDocument.selection.selectAll();
             activeDocument.selection.copy();
             app.activeDocument.close(SaveOptions.DONOTSAVECHANGES);
             activeDocument.paste();
          var saveFile = File(outputFolderE +"/" +file.name.replace(/A/,"E"));
          SavePSD(saveFile);
          app.activeDocument.close(SaveOptions.DONOTSAVECHANGES);
app.preferences.rulerUnits = startRulerUnits;
function SavePSD(saveFile){
psdSaveOptions = new PhotoshopSaveOptions();
psdSaveOptions.embedColorProfile = true;
psdSaveOptions.alphaChannels = true; 
activeDocument.saveAs(saveFile, psdSaveOptions, true, Extension.LOWERCASE);

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    101     GRUND
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    102     SGTXT
    102     WEMPF
    103     SGTXT
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    104     SGTXT
    104     WEMPF
    105     SGTXT
    105     WEMPF
    106     SGTXT
    106     WEMPF
    107     SGTXT
    107     WEMPF
    108     SGTXT
    108     WEMPF
    109     SGTXT
    109     WEMPF
    110     SGTXT
    110     WEMPF
    Regards
    Rakesh

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