DVD Rip and then burn - video stuttering

I'm trying to rip from a dvd (legal) - so I can put it in Final Cut, add subtitles, and burn back to dvd? But so far, I'm getting video that stutters on my final dvd.
I tried to rip the video from dvd using MPEG Streamclip, then edited it in Final Cut before burning a dvd in DVD Studio. But in the ripped video the picture fades in and out.
Then, when I burn to dvd, the video stutters incredibly on a regular dvd player (but not on the computer's dvd player). Anyone know what's going on here?
Suggestions?

I just encoded it using compressor. A little bit of stuttering on the dvd (should I apply a de-interlace filter?)
But still have the problem with a constant color change on the video - is there a different program that I should try to rip with rather than MPEG Streamclip?
Thanks.

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