FCP Send to ST Issue

I'm running into this very odd issue - and it seems to either be affecting only a certain number of files or the issue is just here and there, but;
In trying to send a QT file from the timeline in FCP to ST as an audio file project the file is being deleted from the sequence, ST takes the ENTIRE clip (not the ins and outs i set and brought into the timeline) and if any adjustments are made (ie. norm. or clip noise analysis) it will not allow me to save - coming up with a dialog box telling me i can't.
I'm running FCP 5.1.2 on a PowerMac 10.4.8/ 2 x 2.66 GHz Dual Core Intel Xeon/ 2 GB Ram / with over 120GB on the hard drive i'm working off of.
Thank you for your help!
Asher.

We're working on 720p 60fps DVCPRO stock and through the aja and blackmagic cards, etc...basically we channeled everything into a workflow that FCP has a bug working through.

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