IMac monitor - desktop items disappear/reappear - applications pause

For about a week now, every 2 minutes all of my desktop icons will disappear and then reappear. If I have a folder open, such as the Pictures folder, it will close during this process.
If I am using Firefox or Safari or Photoshop, when the desktop items disappear, so does my mouse's ability to function on the application. I have to click on the application again for the mouse to function on it.
Today I was attempting to burn files to a DVD, but it fails because of this "refreshing" or whatever you call this symptom. Last night my computer did appear to do its weekly backup, (it said it was successful) but I wanted to copy files onto a DVD just in case.
Can someone give me some direction on how to troubleshoot this? In beginner terms? I'd really appreciate it. Thank you.
P.S. The only new things that happened recently that I can think of was that I did a software upgrade (think it was Quicktime...) and downloaded a Wordpress Theme.

Sometimes, starting up in SafeBoot (shift key held after start tone, login window appears
and semi-normal desktop Finder appears; but this is in a reduced function mode) and a
'repair disk permissions' in Disk Utility of the computer's volume on the Mac HD may help.
And after that, or any other minor repairs done in SafeBoot, the computer gets a normal
restart so the rest of the OS will be up and running. If that does not help, there are other
things one may try and do to help it. The matter involves some troubleshooting and a
cause and effect approach is sometimes taken; or on other occasions, a user may try a
long laundry-list of things and hope some issue just goes away; if one or another thing
happens to work. In this instance, learning of a specific issue's cure may not result.
Some items causing a problem, such as those cited above, may be dealt with while
the computer is started up in SafeBoot mode; since extensions and other parts of
such things may be turned off. So, some items like Stuffit can be removed when
they are disabled in SafeBoot. Be sure to run 'repair disk permissions' before and
after software updates, since for some reason this appears to help the system.
Sometimes, just basic system maintenance such as repair disk permissions, running
time/date cron-like routines (see AppleJack download, or OnyX in automation) can
resolve issues that may otherwise involve knowing more about how the system works.
These kinds of tools, free to download and try, can save a bit of trouble; some of that
is preventive in that the routines can be done per schedule to keep the system well.
The bootable installer system disc can be helpful, since there are optional tools in the
Disk Utility on that disc's boot volume; ahead of actually running the Installer itself. A
menu bar appears in the first full Installer window with drop down menus in it, and of
these a few options appear. And in the Disk Utility, chosen from the Installer menu,
there are a variety of tools which can totally obliterate or attempt a repair to the HDD.
An 'archive & install' and then update the resulting new system to the latest version
of OS X including security update, java, quicktime, safari, and other parts would follow;
in some cases, perhaps extreme, this is one way to resolve system software issue.
There are others, but this is among the last but not least. Further study is recommended
before going the A&I plus update the new system folder route; depending on what else
is going on in the system as it exists now. If this archive & install is performed, be sure
the checkbox to save user account info is marked, so the new system will retain this...
In any event...
Good Luck & happy computing!

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