Out Of Memory with tons of free mem

I need help diagnosing a problem I'm having with a server application.
The problem:
I'm getting general flakeyness and sometimes "OutOfMemory: cannot create new native thread" after the application has been running several hours (with 150 or so logins and 300 or so signs rendered).
The environment:
We run Tomcat 3.2.4, Xalan2, JAXP1.1, mysql w/ mm.sql JDBC driver v1.2.0.13, JDK 1.3.1_03
on a SunFire v880 w/ 4 processors, 8Gig RAM running Solaris 8. JVM args set to -server -Xms3g -Xmx3g -XX:NewSize=1024m -XX:MaxNewSize=1024m -XX:SurvivorRatio=16 -XX:+DisableExplicitGC
What I've tried:
I've run under OptimizeIt and found only small amounts of mem being consumed ongoing. Something the GC ought to be able to handle. I've played with the GC parameters in an effort to get this problem under control. I monitor the freemem and can see it go up and down through out the day. The lowest freemem has come down is to 900Meg, then bounces back up to 2.7Gig or so. I suspected fragmentation, but from what I read, hotspot shouldn't allow that to happen.
That exception is thrown from native code in "jvm.cpp" in the JVM_StartThread() method. Comments say it could happen when memory is low (duh).
Our App:
We render in store signs for a major US department store. Our app provides simplified sign composition. We render the signs for printing (generating postscript for the printers). Sometimes we deal with buffers as large as 112Meg. We use XML for sign templates and jobs. We spit out XML from servlets, using XSLT to transform to HTML for the browser. Our sign templates use some XSLT to add common things into the templates as they are loaded. We support image upload to a repository that the sign creators can use in the signs. So, we deal with lots if image data and XML throughout the app. We hit the database throughout the workflow.
HELP!

Hi,
I had the same problem under Linux, but found a solution:
There are 2 different factors for this problem.
There is the "Xss" option of Java and the "stack size"
as reported/set by ulimit:
ulimit -acore file size (blocks) 0
data seg size (kbytes) unlimited
file size (blocks) unlimited
max locked memory (kbytes) unlimited
max memory size (kbytes) unlimited
open files 1024
pipe size (512 bytes) 8
stack size (kbytes) 8192
cpu time (seconds) unlimited
max user processes 16896
virtual memory (kbytes) unlimited
When using java 1.3.1, the "Xss" option is ignored, so
only the "stack size" of ulimit counts. Setting the
stack size using ulimit is done using the -s option:
ulimit -s 8129This sets the stack size per Java thread to 8MB.
The default stack size in Redhat Enterprise Server 3.1
is 10MB. When a Java thread is started, this 10MB is not taken
immediately, but the Linux kernel does guarantee this thread 10MB
if it needs it. Suppose you hava 2GB memory in your machine, then
after starting 200 Java threads, the light goes out even though
"top" reports 1.5GB of free memory. The memory is free, but the
kernel has already promised all of it to the 200 executing Java
threads.
Under java 1.4.2, the Xss option is not ignored. It has the same
effect as the "stack size" set by ulimit; specifying a large amount
of memory for Xss will limit the amount of threads you can start.
Using java 1.4.2 it seems these settings both have to be tuned.
Greetz,
Chris Twigt

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    [90595.573193] CPU 2: hi: 186, btch: 31 usd: 15
    [90595.573196] CPU 3: hi: 186, btch: 31 usd: 26
    [90595.573199] Normal per-cpu:
    [90595.573202] CPU 0: hi: 186, btch: 31 usd: 40
    [90595.573206] CPU 1: hi: 186, btch: 31 usd: 169
    [90595.573209] CPU 2: hi: 186, btch: 31 usd: 36
    [90595.573212] CPU 3: hi: 186, btch: 31 usd: 42
    [90595.573222] active_anon:1689503 inactive_anon:250411 isolated_anon:0
    active_file:194 inactive_file:71 isolated_file:132
    unevictable:33 dirty:0 writeback:0 unstable:0
    free:25610 slab_reclaimable:10929 slab_unreclaimable:10540
    mapped:23637 shmem:347948 pagetables:19310 bounce:0
    [90595.573239] DMA free:15900kB min:128kB low:160kB high:192kB active_anon:0kB inactive_anon:0kB active_file:0kB inactive_file:0kB unevictable:0kB isolated(anon):0kB isolated(file):0kB present:15652kB mlocked:0kB dirty:0kB writeback:0kB mapped:0kB shmem:0kB slab_reclaimable:0kB slab_unreclaimable:8kB kernel_stack:0kB pagetables:0kB unstable:0kB bounce:0kB writeback_tmp:0kB pages_scanned:0 all_unreclaimable? yes
    [90595.573243] lowmem_reserve[]: 0 3246 8034 8034
    [90595.573262] DMA32 free:46380kB min:27256kB low:34068kB high:40884kB active_anon:2961892kB inactive_anon:292364kB active_file:136kB inactive_file:0kB unevictable:0kB isolated(anon):0kB isolated(file):256kB present:3324736kB mlocked:0kB dirty:0kB writeback:0kB mapped:3016kB shmem:403840kB slab_reclaimable:6416kB slab_unreclaimable:2532kB kernel_stack:136kB pagetables:4780kB unstable:0kB bounce:0kB writeback_tmp:0kB pages_scanned:633 all_unreclaimable? yes
    [90595.573266] lowmem_reserve[]: 0 0 4788 4788
    [90595.573283] Normal free:40160kB min:40196kB low:50244kB high:60292kB active_anon:3796120kB inactive_anon:709280kB active_file:640kB inactive_file:408kB unevictable:132kB isolated(anon):0kB isolated(file):272kB present:4902912kB mlocked:132kB dirty:0kB writeback:0kB mapped:91532kB shmem:987952kB slab_reclaimable:37300kB slab_unreclaimable:39620kB kernel_stack:5336kB pagetables:72460kB unstable:0kB bounce:0kB writeback_tmp:0kB pages_scanned:1999 all_unreclaimable? yes
    [90595.573287] lowmem_reserve[]: 0 0 0 0
    [90595.573294] DMA: 1*4kB 1*8kB 1*16kB 0*32kB 2*64kB 1*128kB 1*256kB 0*512kB 1*1024kB 1*2048kB 3*4096kB = 15900kB
    [90595.573310] DMA32: 135*4kB 146*8kB 198*16kB 226*32kB 167*64kB 100*128kB 33*256kB 3*512kB 1*1024kB 0*2048kB 0*4096kB = 46604kB
    [90595.573326] Normal: 604*4kB 998*8kB 604*16kB 366*32kB 109*64kB 11*128kB 0*256kB 0*512kB 0*1024kB 0*2048kB 0*4096kB = 40160kB
    [90595.573342] 348341 total pagecache pages
    [90595.573345] 0 pages in swap cache
    [90595.573349] Swap cache stats: add 0, delete 0, find 0/0
    [90595.573351] Free swap = 0kB
    [90595.573354] Total swap = 0kB
    [90595.630519] 2097136 pages RAM
    [90595.630522] 58564 pages reserved
    [90595.630525] 136144 pages shared
    [90595.630527] 1983598 pages non-shared
    [90595.630530] [ pid ] uid tgid total_vm rss nr_ptes swapents oom_score_adj name
    [90595.630546] [ 130] 0 130 6578 219 17 0 -1000 systemd-udevd
    [90595.630554] [ 133] 0 133 73117 81 139 0 0 systemd-journal
    [90595.630566] [ 344] 0 344 4950 115 13 0 0 bluetoothd
    [90595.630572] [ 346] 84 346 6990 78 18 0 0 avahi-daemon
    [90595.630578] [ 347] 0 347 15801 262 37 0 0 syslog-ng
    [90595.630584] [ 349] 84 349 6957 54 17 0 0 avahi-daemon
    [90595.630590] [ 351] 0 351 3302 137 12 0 0 crond
    [90595.630596] [ 372] 0 372 17493 259 37 0 0 cupsd
    [90595.630602] [ 379] 0 379 3798 151 12 0 0 smartd
    [90595.630607] [ 386] 0 386 6543 86 19 0 0 systemd-logind
    [90595.630613] [ 394] 81 394 4592 307 15 0 -900 dbus-daemon
    [90595.630621] [ 485] 0 485 2031 29 10 0 0 agetty
    [90595.630626] [ 496] 0 496 5594 55 16 0 0 kdm
    [90595.630632] [ 510] 0 510 52980 856 40 0 0 colord
    [90595.630638] [ 619] 89 619 99000 9633 53 0 0 mysqld
    [90595.630644] [ 621] 0 621 25954 284 51 0 0 smbd
    [90595.630649] [ 622] 0 622 4248 67 14 0 0 rpcbind
    [90595.630655] [ 626] 87 626 7821 140 18 0 0 ntpd
    [90595.630661] [ 627] 99 627 166006 1019 53 0 0 smbnetfs
    [90595.630667] [ 628] 0 628 25954 295 50 0 0 smbd
    [90595.630672] [ 630] 0 630 11313 126 24 0 0 netatalk
    [90595.630678] [ 631] 0 631 42642 213 45 0 0 afpd
    [90595.630684] [ 632] 0 632 10770 135 23 0 0 cnid_metad
    [90595.630692] [ 700] 0 700 5460 145 14 0 0 rpc.mountd
    [90595.630698] [ 725] 1000 725 3824 93 13 0 0 gpg-agent
    [90595.630704] [ 728] 1000 728 3162 79 10 0 0 ssh-agent
    [90595.630711] [ 755] 0 755 55267 265 43 0 0 upowerd
    [90595.630716] [ 758] 102 758 92425 2034 45 0 0 polkitd
    [90595.630722] [ 799] 0 799 48905 1302 33 0 0 udisks-daemon
    [90595.630728] [ 802] 0 802 11885 87 26 0 0 udisks-daemon
    [90595.630734] [ 1335] 0 1335 86929 994 39 0 0 udisksd
    [90595.630741] [11256] 1000 11256 71127 1366 127 0 0 kvm.kss
    [90595.630747] [11536] 1000 11536 3162 81 10 0 0 ssh-agent
    [90595.630755] [23743] 0 23743 1729973 833273 1766 0 0 X
    [90595.630761] [23752] 0 23752 20300 156 46 0 0 kdm
    [90595.630767] [23766] 1000 23766 3424 113 12 0 0 startkde
    [90595.630773] [23782] 1000 23782 4495 57 14 0 0 dbus-launch
    [90595.630779] [23783] 1000 23783 5097 605 16 0 0 dbus-daemon
    [90595.630785] [23828] 1000 23828 3162 80 10 0 0 ssh-agent
    [90595.630792] [23842] 1000 23842 1013 20 7 0 -300 start_kdeinit
    [90595.630798] [23843] 1000 23843 94032 3877 155 0 -300 kdeinit4
    [90595.630804] [23844] 1000 23844 95626 4337 139 0 0 klauncher
    [90595.630810] [23846] 1000 23846 253723 5959 246 0 0 kded4
    [90595.630817] [23850] 1000 23850 94334 1559 133 0 0 kactivitymanage
    [90595.630823] [23855] 1000 23855 116905 4879 179 0 0 kglobalaccel
    [90595.630829] [23858] 1000 23858 1047 18 8 0 0 kwrapper4
    [90595.630835] [23859] 1000 23859 137438 4925 187 0 0 ksmserver
    [90595.630841] [23861] 1000 23861 702816 10165 249 0 0 kwin_gles
    [90595.630847] [23865] 1000 23865 200077 4268 227 0 0 knotify4
    [90595.630853] [23868] 1000 23868 1088130 25387 341 0 0 plasma-desktop
    [90595.630859] [23874] 1000 23874 38087 473 37 0 0 akonadi_control
    [90595.630865] [23876] 1000 23876 505241 3598 103 0 0 akonadiserver
    [90595.630871] [23878] 1000 23878 574985 24743 117 0 0 mysqld
    [90595.630877] [23894] 1000 23894 69951 1263 126 0 0 kuiserver
    [90595.630883] [23901] 1000 23901 60212 619 52 0 0 mission-control
    [90595.630889] [23914] 1000 23914 46524 130 27 0 0 gvfsd
    [90595.630895] [23918] 1000 23918 84651 169 35 0 0 gvfsd-fuse
    [90595.630902] [23947] 1000 23947 113986 4340 138 0 0 nepomukserver
    [90595.630908] [23950] 1000 23950 399006 3880 160 0 0 nepomukservices
    [90595.630914] [23951] 1000 23951 360934 10686 284 0 0 krunner
    [90595.630920] [23952] 1000 23952 42460 554 73 0 0 kwrited
    [90595.630926] [23961] 1000 23961 155149 36357 100 0 0 virtuoso-t
    [90595.630932] [23972] 1000 23972 77300 1183 108 0 0 akonadi_agent_l
    [90595.630938] [23973] 1000 23973 77298 1172 110 0 0 akonadi_agent_l
    [90595.630962] [23974] 1000 23974 130638 2426 233 0 0 akonadi_archive
    [90595.630968] [23975] 1000 23975 75675 1161 107 0 0 akonadi_agent_l
    [90595.630974] [23976] 1000 23976 83467 1884 153 0 0 akonadi_davgrou
    [90595.630984] [23977] 1000 23977 140768 6502 159 0 0 akonadi_imap_re
    [90595.630990] [23978] 1000 23978 141137 3122 163 0 0 akonadi_imap_re
    [90595.630996] [23979] 1000 23979 140224 2189 163 0 0 akonadi_imap_re
    [90595.631002] [23980] 1000 23980 140250 2219 162 0 0 akonadi_imap_re
    [90595.631008] [23981] 1000 23981 135682 2267 155 0 0 akonadi_imap_re
    [90595.631014] [23982] 1000 23982 77393 1304 115 0 0 akonadi_agent_l
    [90595.631020] [23983] 1000 23983 85244 1429 152 0 0 akonadi_maildis
    [90595.631026] [23984] 1000 23984 150708 2918 242 0 0 akonadi_mailfil
    [90595.631032] [23985] 1000 23985 93652 1646 142 0 0 akonadi_nepomuk
    [90595.631039] [24015] 1000 24015 118164 5056 184 0 0 kwalletd
    [90595.631045] [24046] 1000 24046 71739 1232 127 0 0 nepomukcontroll
    [90595.631051] [24048] 1000 24048 159756 5386 194 0 0 kmix
    [90595.631057] [24050] 1000 24050 107757 3361 165 0 0 yakuake
    [90595.631063] [24053] 1000 24053 4016 188 13 0 0 bash
    [90595.631069] [24054] 1000 24054 522067 15559 303 0 0 kmail
    [90595.631075] [24056] 1000 24056 140210 5712 193 0 0 konsole
    [90595.631081] [24059] 1000 24059 164026 10049 210 0 0 dolphin
    [90595.631087] [24060] 1000 24060 149429 28538 222 0 0 okular
    [90595.631093] [24066] 1000 24066 4016 173 13 0 0 bash
    [90595.631099] [24068] 1000 24068 4016 145 15 0 0 bash
    [90595.631105] [24069] 1000 24069 4016 144 13 0 0 bash
    [90595.631111] [24101] 1000 24101 71099 1288 129 0 0 kwalletmanager
    [90595.631117] [24132] 1000 24132 72960 1114 100 0 0 nepomukservices
    [90595.631123] [24133] 1000 24133 58987 1150 111 0 0 nepomukservices
    [90595.631129] [24134] 1000 24134 93069 1227 104 0 0 nepomukservices
    [90595.631135] [24135] 1000 24135 110639 1406 106 0 0 nepomukservices
    [90595.631141] [24164] 1000 24164 94897 4341 137 0 0 kio_http_cache_
    [90595.631147] [24188] 1000 24188 501236 12080 219 0 0 dropbox
    [90595.631153] [24194] 1000 24194 112342 5736 211 0 0 python2
    [90595.631159] [24196] 1000 24196 113369 1827 141 0 0 polkit-kde-auth
    [90595.631165] [24197] 1000 24197 118809 4946 184 0 0 klipper
    [90595.631171] [24286] 1000 24286 243067 72086 349 0 0 chromium
    [90595.631177] [24289] 1000 24289 74768 1244 108 0 0 chromium
    [90595.631183] [24290] 1000 24290 1588 20 9 0 0 chromium-sandbo
    [90595.631189] [24292] 1000 24292 83952 1441 128 0 0 chromium
    [90595.631195] [24297] 1000 24297 43036 332 71 0 0 nacl_helper_boo
    [90595.631201] [24298] 1000 24298 88050 1446 107 0 0 chromium
    [90595.631208] [24330] 1000 24330 100617 7256 156 0 200 chromium
    [90595.631214] [24331] 1000 24331 241528 13028 235 0 300 CrRendererMain
    [90595.631220] [24339] 1000 24339 235630 7569 188 0 300 CrRendererMain
    [90595.631226] [24427] 1000 24427 249522 16199 192 0 300 CrRendererMain
    [90595.631232] [24449] 1000 24449 236018 8275 170 0 300 CrRendererMain
    [90595.631238] [24456] 1000 24456 261944 33831 241 0 300 CrRendererMain
    [90595.631244] [24470] 1000 24470 244557 16989 195 0 300 CrRendererMain
    [90595.631250] [24477] 1000 24477 235153 6332 163 0 300 CrRendererMain
    [90595.631257] [24516] 1000 24516 247487 19645 198 0 300 CrRendererMain
    [90595.631263] [24524] 1000 24524 233780 5534 160 0 300 CrRendererMain
    [90595.631270] [24531] 1000 24531 235357 6770 162 0 300 CrRendererMain
    [90595.631275] [24539] 1000 24539 231269 2816 153 0 300 CrRendererMain
    [90595.631282] [24546] 1000 24546 233780 5587 161 0 300 CrRendererMain
    [90595.631288] [24571] 1000 24571 206429 26972 318 0 100 chromium
    [90595.631294] [24600] 1000 24600 240853 11596 227 0 300 CrRendererMain
    [90595.631300] [24607] 1000 24607 233780 5610 161 0 300 CrRendererMain
    [90595.631306] [24614] 1000 24614 233342 5046 159 0 300 CrRendererMain
    [90595.631312] [24621] 1000 24621 233516 5515 160 0 300 CrRendererMain
    [90595.631318] [24628] 1000 24628 247850 20652 212 0 300 CrRendererMain
    [90595.631324] [24645] 1000 24645 239585 10088 178 0 300 CrRendererMain
    [90595.631330] [24660] 1000 24660 234943 6678 164 0 300 CrRendererMain
    [90595.631336] [24676] 1000 24676 231269 2788 152 0 300 CrRendererMain
    [90595.631342] [24687] 1000 24687 234767 6433 163 0 300 CrRendererMain
    [90595.631349] [24985] 1000 24985 3423 102 12 0 0 spotify
    [90595.631355] [24986] 1000 24986 403477 39715 418 0 0 spotify
    [90595.631361] [25262] 1000 25262 66356 160 31 0 0 at-spi-bus-laun
    [90595.631367] [25316] 1000 25316 71840 826 41 0 0 telepathy-logge
    [90595.631373] [25762] 1000 25762 245974 14682 197 0 300 CrRendererMain
    [90595.631380] [26697] 1000 26697 4016 173 13 0 0 bash
    [90595.631386] [26704] 0 26704 523371 295 61 0 0 console-kit-dae
    [90595.631392] [30603] 1000 30603 159562 7909 201 0 0 dolphin
    [90595.631399] [ 448] 1000 448 258442 24018 224 0 300 CrRendererMain
    [90595.631405] [ 607] 1000 607 249132 20239 208 0 300 CrRendererMain
    [90595.631412] [ 1704] 1000 1704 242202 13900 185 0 300 CrRendererMain
    [90595.631420] [ 2144] 99 2144 168210 1086 60 0 0 smbnetfs
    [90595.631426] [ 2188] 0 2188 9170 214 23 0 0 crond
    [90595.631433] [ 2195] 0 2195 2063 80 10 0 0 anacron
    [90595.631438] [ 2211] 0 2211 2852 80 10 0 0 sadc
    [90595.631446] [ 2265] 1000 2265 58071 1673 114 0 0 telepathy-haze
    [90595.631452] [ 2267] 1000 2267 98377 835 60 0 0 telepathy-gabbl
    [90595.631458] [ 2280] 1000 2280 497141 100140 451 0 100 chromium
    [90595.631464] [ 2299] 1000 2299 239759 10516 178 0 300 CrRendererMain
    [90595.631469] [ 2666] 1000 2666 118396 4444 149 0 0 kio_http
    [90595.631475] [ 2667] 1000 2667 118396 4444 149 0 0 kio_http
    [90595.631481] [ 2672] 99 2672 167176 1130 57 0 0 smbnetfs
    [90595.631487] [ 2674] 99 2674 168210 1111 60 0 0 smbnetfs
    [90595.631492] Out of memory: Kill process 23743 (X) score 378 or sacrifice child
    [90595.631499] Killed process 23743 (X) total-vm:6919892kB, anon-rss:3264748kB, file-rss:68344kB
    Last edited by boast (2012-11-28 16:06:53)

    Max-P wrote:
    According to this log, process "dropbox" triggers oom-killer, which has the effect of killing X because it's the most memory-hungry process (833 Mb, I think).
    Does it stop if you stop dropbox?
    No. But even now X org averages almost 2gb and eventually goes up to 3gb.
    Do you have a swap partition?
    no
    ewaller wrote:Are you, by chance, running testing? 
    On Intel, I had some similar (but not exact) problems crop up recently.  Turning off testing helped.
    Nah, no testing.
    It feels like a bug, but it seems like I'm only the one. Not sure what could of changed.

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