Problem doing a .EXE

Hello everyone and thanks in advance.
I have ordered to create an executable from the work of a colleague, is my first job in labview so I'm a little newbie.
I keep this manual to create
http://www.ni.com/white-paper/3303/en
I do the application but then it deas't recognize the card connected to the computer. (without the executable works perfectly from labview)
I get 3 warnings when i create the. EXE, and LabVIEW duplicates some basics vi's (matrix operations), and I created 3 folders where I generate the executable.
Any ideas?
thanks

by the way, the warning is the following.
LabVIEW prevented a file name collision during the build. Duplicate file names cannot be copied to the same destination. You can rename files as part of the build process to avoid name conflicts.
The following files were moved to a unique location:
C:\Archivos de programa\National Instruments\LabVIEW 8.5\vi.lib\Analysis\Matrix\Support\RealMatrix\RealMatrix.ctl
C:\Archivos de programa\National Instruments\LabVIEW 8.5\vi.lib\Analysis\Matrix\Datatypes\RealMatrix.ctl
C:\Archivos de programa\National Instruments\LabVIEW 8.5\vi.lib\Analysis\Matrix\Support\ComplexMatrix\ComplexMatrix.ctl
C:\Archivos de programa\National Instruments\LabVIEW 8.5\vi.lib\Analysis\Matrix\Datatypes\ComplexMatrix.ctl
C:\Archivos de programa\National Instruments\LabVIEW 8.5\vi.lib\Analysis\Matrix\Numeric\Subtract\Subtract - RM,RM.vi
C:\Archivos de programa\National Instruments\LabVIEW 8.5\vi.lib\Analysis\Matrix\Support\RealMatrix\Methods\Numeric.llb\Subtract - RM,RM.vi
thanks,

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